RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 POLR2MP0CAP2 368 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 CLCN2P51788 898 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 MAP2K6P52564 334 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 AMPD3Q01432 767 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 IKQ13123 557 aaPredicted RBP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 BAATQ14032 418 aaPredicted RBP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 TRIM29Q14134 588 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 GRB14Q14449 540 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 SAFBQ15424 915 aaKnown RBP eCLIP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 CCL14Q16627 93 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 UBE2SQ16763 222 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 USH1GQ495M9 461 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 Q4G0T1 1027 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 EMC10Q5UCC4 262 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 CPXCR1Q8N123 301 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 LINC00301Q8NCQ3 95 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 GPRC5AQ8NFJ5 357 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 RP9Q8TA86 221 aaKnown RBP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 BRIX1Q8TDN6 353 aaKnown RBP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 HERVK_113Q902F9 699 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 ZBTB9Q96C00 473 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 MTMR9Q96QG7 549 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 PTDSS2Q9BVG9 487 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 QTRT1Q9BXR0 403 aaKnown RBP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 FTOQ9C0B1 505 aaKnown RBP eCLIP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 TTYH3Q9C0H2 523 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 ACAD9Q9H845 621 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 KCNMB3Q9NPA1 279 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 SERTAD3Q9UJW9 196 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 COG5Q9UP83 839 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 COL11A1P12107 1806 aaPredicted RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 ZNF236Q9UL36 1845 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 ATRXP46100 2492 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 LCTP09848 1927 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 MYH6P13533 1939 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 FAM86B1E9PN63 330 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 DCLK1O15075 740 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 PPP6R2O75170 966 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 DNAJB5O75953 348 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 YEATS4O95619 227 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 FAM86B2P0C5J1 330 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 GCFC2P16383 781 aaKnown RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 HOXA13P31271 388 aaPredicted RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 HOXA4Q00056 320 aaPredicted RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 GTF2H3Q13889 308 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 IQCB1Q15051 598 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 NONOQ15233 471 aaKnown RBP eCLIP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 IL17AQ16552 155 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 JAKMIP3Q5VZ66 844 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 ANO1Q5XXA6 986 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 XRRA1Q6P2D8 792 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 PIK3AP1Q6ZUJ8 805 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 NIPA1Q7RTP0 329 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 IL31RAQ8NI17 732 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 ETNPPLQ8TBG4 499 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 TBCKQ8TEA7 893 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 INPP4AQ96PE3 977 aaPredicted RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 TAAR1Q96RJ0 339 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 FSD1LQ9BXM9 530 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 TMEM60Q9H2L4 133 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 DDX20Q9UHI6 824 aaKnown RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 FBXO2Q9UK22 296 aaPredicted RBP6.04□□□□□ -1.44
C9orf3-205ENST00000427193 SSX2IPQ9Y2D8 614 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 ATP6V1DQ9Y5K8 247 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 UBIAD1Q9Y5Z9 338 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 CLIC4Q9Y696 253 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 PLXNA1Q9UIW2 1896 aa6.04□□□□□ -1.44
C9orf3-205ENST00000427193 NCOR2Q9Y618 2525 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 LRRC37A2A6NM11 1700 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 SLC15A5A6NIM6 579 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 TBX3O15119 743 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 SLC37A4O43826 429 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 SNUPNO95149 360 aaKnown RBP6.03□□□□□ -1.44
C9orf3-205ENST00000427193 TDP2O95551 362 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 POU2F2P09086 479 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 NPSP0C0P6 89 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 ENGP17813 658 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 MAPK4P31152 587 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 ICAM3P32942 547 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 PRPHP41219 470 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 RGS2P41220 211 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 CCNA1P78396 465 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 CNTN2Q02246 1040 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 TLE2Q04725 743 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 PGM5Q15124 567 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 RAB30Q15771 203 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 CEP55Q53EZ4 464 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 TMEM240Q5SV17 173 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 ARL6IP4Q66PJ3 421 aaKnown RBP6.03□□□□□ -1.44
C9orf3-205ENST00000427193 PARS2Q7L3T8 475 aaKnown RBP6.03□□□□□ -1.44
C9orf3-205ENST00000427193 GPR142Q7Z601 462 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 LRRC71Q8N4P6 559 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 CYP2W1Q8TAV3 490 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 ATG4AQ8WYN0 398 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 MOGAT1Q96PD6 335 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 IWS1Q96ST2 819 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 RMDN3Q96TC7 470 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 SH2D3AQ9BRG2 576 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 GLOD4Q9HC38 313 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms