RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PCED1BQ96HM7 432 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 TNIP3Q96KP6 325 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 LRRC3BQ96PB8 259 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 GSDMAQ96QA5 445 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 CYP2S1Q96SQ9 504 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 DPEP3Q9H4B8 488 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 PRORYQ9H606 182 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 RBM12Q9NTZ6 932 aaKnown RBP6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 OBP2AQ9NY56 170 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 DDX56Q9NY93 547 aaKnown RBP6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 EHD2Q9NZN4 543 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 TNFRSF10DQ9UBN6 386 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 MCM8Q9UJA3 840 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 NME7Q9Y5B8 376 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 DOCK6Q96HP0 2047 aa6.52□□□□□ -1.37
NIF3L1-207ENST00000426253 URB1O60287 2271 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 COL5A1P20908 1838 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TSC2P49815 1807 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 BCLAF3A2AJT9 711 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 C7orf72A4D263 438 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CLDN5O00501 218 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 NOL4O94818 638 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 RHOBTB1O94844 696 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 PAPSS2O95340 614 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ASS1P00966 412 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TGFB1P01137 390 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 HLA-DRAP01903 254 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TRIM49P0CI25 452 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TRIM49CP0CI26 452 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CHRNB1P11230 501 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 HDCP19113 662 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CDK11BP21127 795 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 GCLMP48507 274 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 MLLT6P55198 1093 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 FAM193AP78312 1265 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ENPEPQ07075 957 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 PPP3CAQ08209 521 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 LSAMPQ13449 338 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 EDRF1Q3B7T1 1238 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 PLK5Q496M5 336 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ZCWPW2Q504Y3 356 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ANKRD40Q6AI12 368 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 SPOPLQ6IQ16 392 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 Q6ZS52 159 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ACOT1Q86TX2 421 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CPNE8Q86YQ8 564 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CRYBG2Q8N1P7 616 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 PNPLA1Q8N8W4 532 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 B3GALNT2Q8NCR0 500 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CCDC150Q8NCX0 1101 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 PCDH19Q8TAB3 1148 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TTC8Q8TAM2 541 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 SPATA20Q8TB22 786 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 USP13Q92995 863 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 EEF2KMTQ96G04 330 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ZFYVE19Q96K21 471 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 ZC3H10Q96K80 434 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 SPATA17Q96L03 361 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 C8orf48Q96LL4 319 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 CEP295NLQ96MC4 621 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TSG101Q99816 390 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 MED10Q9BTT4 135 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 B3GNT5Q9BYG0 378 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 GTPBP4Q9BZE4 634 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TRIM4Q9C037 500 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 SDCBP2Q9H190 292 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 C8orf33Q9H7E9 229 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 MMRN2Q9H8L6 949 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 METTL14Q9HCE5 456 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TRPC7Q9HCX4 862 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 GKN1Q9NS71 199 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TDP1Q9NUW8 608 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 C2orf42Q9NWW7 574 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TRPM5Q9NZQ8 1165 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 COL12A1Q99715 3063 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 APC2O95996 2303 aa6.51□□□□□ -1.37
NIF3L1-207ENST00000426253 TRAV19A0A0A6YYK7 116 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 TEX51A0A1B0GUA7 166 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 F8VP50 259 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 GSTA4O15217 222 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 STX10O60499 249 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 NPHS1O60500 1241 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 PRAMEF12O95522 483 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 EPB41P11171 864 aaKnown RBP6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 CCNE1P24864 410 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 GTF2H1P32780 548 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 PIK3CAP42336 1068 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 PPP3CCP48454 512 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 NDST1P52848 882 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 CACNA2D1P54289 1103 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 NOP14P78316 857 aaKnown RBP6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 IRX4P78413 519 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 FKBP3Q00688 224 aaKnown RBP6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 STIM1Q13586 685 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 ZNF268Q14587 947 aaPredicted RBP6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 COBLL1Q53SF7 1204 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 MBLAC2Q68D91 279 aa6.5□□□□□ -1.37
NIF3L1-207ENST00000426253 KRT39Q6A163 491 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms