RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 GAGE13Q4V321 117 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 COLEC12Q5KU26 742 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CCDC122Q5T0U0 273 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ATXN7L2Q5T6C5 722 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CST9LP1Q5W188 147 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 OTUD7BQ6GQQ9 843 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 KLHL35Q6PF15 583 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 PTCHD4Q6ZW05 846 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 GAREM2Q75VX8 874 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ERN2Q76MJ5 926 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SYT13Q7L8C5 426 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 PLPPR4Q7Z2D5 763 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MIER3Q7Z3K6 550 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 BMP8AQ7Z5Y6 402 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CLEC14AQ86T13 490 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CTAGE6Q86UF2 777 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 FAM160B2Q86V87 743 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RASGRP3Q8IV61 690 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CCDC28AQ8IWP9 274 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CTAGE4Q8IX94 777 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ELOA2Q8IYF1 753 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SYCP3Q8IZU3 236 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD44Q8N8A2 993 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ZBTB8BQ8NAP8 495 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 OR56B2PQ8NGI1 322 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 OR52K1Q8NGK4 314 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 DUSP19Q8WTR2 217 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RNF139Q8WU17 664 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 WDR60Q8WVS4 1066 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 KCNE4Q8WWG9 221 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NEU4Q8WWR8 484 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 GAB3Q8WWW8 586 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 STAMQ92783 540 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ERO1AQ96HE7 468 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CNOT6LQ96LI5 555 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CFAP57Q96MR6 1250 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 WDR92Q96MX6 357 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RBM14Q96PK6 669 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NR1H4Q96RI1 486 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RUFY1Q96T51 708 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 GPHA2Q96T91 129 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SH3GL2Q99962 352 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NAA11Q9BSU3 229 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 TTPALQ9BTX7 342 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 TUBB6Q9BUF5 446 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ACPTQ9BZG2 426 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SLC5A7Q9GZV3 580 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 HAPLN2Q9GZV7 340 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 STMN4Q9H169 189 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 VPS16Q9H269 839 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MTG2Q9H4K7 406 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SH2D4AQ9H788 454 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MMRN2Q9H8L6 949 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 LTB4R2Q9NPC1 389 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 IL23AQ9NPF7 189 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 TRPV5Q9NQA5 729 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SLC35D1Q9NTN3 355 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 EXOC1Q9NV70 894 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ATAD3AQ9NVI7 634 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 DDX18Q9NVP1 670 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 TUBE1Q9UJT0 475 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MID2Q9UJV3 735 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SARDHQ9UL12 918 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ZDHHC8Q9ULC8 765 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NFU1Q9UMS0 254 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 PPIEQ9UNP9 301 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 GDAQ9Y2T3 454 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 PCDHB6Q9Y5E3 794 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SNX14Q9Y5W7 946 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 TRBC2A0A5B9 178 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SYCE3A1L190 88 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 GAGE10A6NGK3 116 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 H0YCG3 227 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PEX12O00623 359 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 CTAGE5O15320 804 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 CD3EAPO15446 510 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 MAGEB3O15480 346 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 EIF2S1P05198 315 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ANXA6P08133 673 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 TPBGLP0DKB5 382 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SRCP12931 536 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PRG2P13727 222 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PDGFRAP16234 1089 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PECAM1P16284 738 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ACVR2AP27037 513 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 GDI1P31150 447 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SLC5A2P31639 672 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 BMPR1AP36894 532 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SKIV2L2P42285 1042 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PIK3CGP48736 1102 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 CAMLGP49069 296 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 NPY4RP50391 375 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 GBX2P52951 348 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ATXN3P54252 364 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 EIF3BP55884 814 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 STX1BP61266 288 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 POU6F2P78424 691 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 MXRA7P84157 204 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms