RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 NT5MQ9NPB1 228 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CACNG3O60359 315 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 METTL18O95568 372 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CCNB1P14635 433 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 PTPN3P26045 913 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 GUCY2DQ02846 1103 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CCDC117Q8IWD4 279 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 PGBD5Q8N414 524 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CCDC89Q8N998 374 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ATL2Q8NHH9 583 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 SPATA22Q8NHS9 363 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 HDAC11Q96DB2 347 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 LMLNQ96KR4 655 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ASIC3Q9UHC3 531 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 DMDP11532 3685 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 CCDC188H7C350 402 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 HLA-DQB2P05538 268 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 CISD3P0C7P0 127 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 HTR7P34969 479 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 RPL22P35268 128 aaKnown RBP13.71□□□□□ -0.22
PRPF39-202ENST00000424478 ZNF135P52742 658 aaPredicted RBP13.71□□□□□ -0.22
PRPF39-202ENST00000424478 ZP2Q05996 745 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 GPS1Q13098 491 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 IHHQ14623 411 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.22
PRPF39-202ENST00000424478 CSGALNACT1Q8TDX6 532 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 NSMCE3Q96MG7 304 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 PNKPQ96T60 521 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 ACOX2Q99424 681 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 MAGEH1Q9H213 219 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 RBM22Q9NW64 420 aaKnown RBP eCLIP13.71□□□□□ -0.223e-6■■■□□ 18.5
PRPF39-202ENST00000424478 KIAA1522Q9P206 1035 aaPredicted RBP13.71□□□□□ -0.22
PRPF39-202ENST00000424478 KLHL8Q9P2G9 620 aaPredicted RBP13.71□□□□□ -0.22
PRPF39-202ENST00000424478 DEC1Q9P2X7 70 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 CA14Q9ULX7 337 aa13.71□□□□□ -0.22
PRPF39-202ENST00000424478 GOLGA8MH3BSY2 632 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 ZMPSTE24O75844 475 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 ITGAVP06756 1048 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 HLA-EP13747 358 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 MTA1Q13330 715 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 TUBB2AQ13885 445 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 ELF2Q15723 593 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PARP15Q460N3 678 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 ACCSLQ4AC99 568 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 MBLAC2Q68D91 279 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PID1Q7Z2X4 250 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 CACUL1Q86Y37 369 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 LZTR1Q8N653 840 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-202ENST00000424478 TUBB2BQ9BVA1 445 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 MARK1Q9P0L2 795 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PIAS3Q9Y6X2 628 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 TCRBV7S3A2A0A539 114 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 HOXC11O43248 304 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-202ENST00000424478 MX2P20592 715 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PSMB4P28070 264 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 CD68P34810 354 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PON2Q15165 354 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 MPP7Q5T2T1 576 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-202ENST00000424478 ACE2Q9BYF1 805 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PDFQ9HBH1 243 aa13.7□□□□□ -0.22
PRPF39-202ENST00000424478 PRAMEF11O60813 436 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 USP12O75317 370 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 MT-CYBP00156 380 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-202ENST00000424478 GALK1P51570 392 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ANKRD20A2Q5SQ80 823 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ANKRD20A1Q5TYW2 823 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ANKRD20A3Q5VUR7 823 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 MMGT1Q8N4V1 131 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ATP11CQ8NB49 1132 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 UBE2Q2Q8WVN8 375 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 IFT81Q8WYA0 676 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 E2F7Q96AV8 911 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
PRPF39-202ENST00000424478 APOL2Q9BQE5 337 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 PCYOX1Q9UHG3 505 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 BCLAF3A2AJT9 711 aaKnown RBP13.69□□□□□ -0.22
PRPF39-202ENST00000424478 KDELR3O43731 214 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 NFKB1P19838 968 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
PRPF39-202ENST00000424478 FNTAP49354 379 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 YBEYP58557 167 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-202ENST00000424478 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
PRPF39-202ENST00000424478 DSC2Q02487 901 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 P3H1Q32P28 736 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ANKRD22Q5VYY1 191 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ANKZF1Q9H8Y5 726 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 HCN2Q9UL51 889 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 HPCAL4Q9UM19 191 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 MYO15AQ9UKN7 3530 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 LOC730098B7Z3J9 87 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms