RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DNAI1Q9UI46 699 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 AP4E1Q9UPM8 1137 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 HS3ST2Q9Y278 367 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
USP49-204ENST00000423567 ATXN2Q99700 1313 aaKnown RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 USP34Q70CQ2 3546 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 SSU72P8A0A1W2PR75 194 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 EEF2KO00418 725 aaKnown RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 MID1O15344 667 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 DAPK3O43293 454 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 RNASEH2AO75792 299 aaKnown RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 SEMA4FO95754 770 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 CFIP05156 583 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 SRCP12931 536 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 C5AR1P21730 350 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 SLC8A1P32418 973 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 ZNF135P52742 658 aaPredicted RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 ATXN3P54252 364 aaPredicted RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 PIGHQ14442 188 aaPredicted RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 PUM1Q14671 1186 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP49-204ENST00000423567 POLD3Q15054 466 aaPredicted RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 ERMARDQ5T6L9 678 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 TCEAL6Q6IPX3 200 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 LINGO4Q6UY18 593 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 Q6ZVU0 165 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 NLRP14Q86W24 1093 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 SLC41A1Q8IVJ1 513 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 PYROXD2Q8N2H3 581 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 RTL3Q8N8U3 475 aaKnown RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 FRS2Q8WU20 508 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 SNX19Q92543 992 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 TCEAL3Q969E4 200 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 CCDC42Q96M95 316 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 NUP85Q9BW27 656 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 MAGEB5Q9BZ81 275 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 THAP2Q9H0W7 228 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 DHX35Q9H5Z1 703 aaKnown RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 ABHD10Q9NUJ1 306 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 WDR70Q9NW82 654 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 ZNF212Q9UDV6 495 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 PCSK1NQ9UHG2 260 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 IP6K2Q9UHH9 426 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 EVLQ9UI08 416 aaPredicted RBP11.19□□□□□ -0.62
USP49-204ENST00000423567 PILRBQ9UKJ0 227 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 FZD4Q9ULV1 537 aa11.19□□□□□ -0.62
USP49-204ENST00000423567 CXorf51AA0A1B0GTR3 108 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 A0A1W2PP55 124 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 LRRC72A6NJI9 287 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 METTL12A8MUP2 240 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 AKR1B15C9JRZ8 316 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 MYO1FO00160 1098 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 MCF2LO15068 1137 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 MFAP3LO75121 409 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 MT-CO1P00395 513 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 CYP1A2P05177 515 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 H2AFZP0C0S5 128 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 VAV1P15498 845 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 GOT1P17174 413 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 MIPP30301 263 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 ACSL1P33121 698 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 PCK1P35558 622 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 SERPINH1P50454 418 aaKnown RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 DNA2P51530 1060 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 GALCP54803 685 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 ADKP55263 362 aaKnown RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 GFPT1Q06210 699 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 CCDC15Q0P6D6 951 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 SLC18A3Q16572 532 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 BOLA3Q53S33 107 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 PPP6R3Q5H9R7 873 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 DCAF12L1Q5VU92 463 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 C22orf39Q6P5X5 142 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 SLC23A3Q6PIS1 610 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 H2AFVQ71UI9 128 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 PSTKQ8IV42 348 aaKnown RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 HDDC3Q8N4P3 179 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 CTNNBL1Q8WYA6 563 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 ARHGEF2Q92974 986 aaKnown RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 RMDN1Q96DB5 314 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 FAM129BQ96TA1 746 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 RTKNQ9BST9 563 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 TRIM7Q9C029 511 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 CEP44Q9C0F1 390 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 MIR1-1HGQ9H1L0 117 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 DYRK4Q9NR20 520 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 TMEM74BQ9NUR3 256 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 GPATCH2LQ9NWQ4 482 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 CTTNBP2NLQ9P2B4 639 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 LCMT1Q9UIC8 334 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 ANAPC7Q9UJX3 599 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 SLC6A14Q9UN76 642 aa11.18□□□□□ -0.62
USP49-204ENST00000423567 MUC22E2RYF6 1773 aaPredicted RBP11.18□□□□□ -0.62
USP49-204ENST00000423567 EML5Q05BV3 1969 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 PATE3B3GLJ2 98 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms