RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 CLDN25C9JDP6 229 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 E7ENX8 843 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 NRP1O14786 923 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 MSI1O43347 362 aaKnown RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 GUCY1B2O75343 617 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 IL18RAPO95256 599 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 C4BPAP04003 597 aaKnown RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 CHRNGP07510 517 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ALOX5P09917 674 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 POLR2IP36954 125 aaKnown RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
CALD1-205ENST00000422748 TMBIM6P55061 237 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 IFITM3Q01628 133 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ZNF846Q147U1 533 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 USP43Q70EL4 1123 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 EMC1Q8N766 993 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ATP6V0D2Q8N8Y2 350 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ABHD11Q8NFV4 315 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 OR13F1Q8NGS4 319 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 TCF12Q99081 682 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PDZD7Q9H5P4 517 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 ZBTB26Q9HCK0 441 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 MOCS1Q9NZB8 636 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 PSAT1Q9Y617 370 aa13.42□□□□□ -0.26
CALD1-205ENST00000422748 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 KRT75O95678 551 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 TCF3P15923 654 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 NPR1P16066 1061 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 YBX3P16989 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
CALD1-205ENST00000422748 TGM1P22735 817 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 RBL1P28749 1068 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 GRIA1P42261 906 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 NPTX2P47972 431 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 GTF2IP78347 998 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 CNTN2Q02246 1040 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 HERC3Q15034 1050 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 DGKDQ16760 1214 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 GJC2Q5T442 439 aaPredicted RBP13.41□□□□□ -0.26
CALD1-205ENST00000422748 MFSD2AQ8NA29 543 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 PDPRQ8NCN5 879 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 PDZD8Q8NEN9 1154 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 CYGBQ8WWM9 190 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 CSF3RQ99062 836 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 APBA2Q99767 749 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 KLQ9UEF7 1012 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 CARD8Q9Y2G2 431 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 MGEA5O60502 916 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 MAGEA3P43357 314 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 CCR10P46092 362 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 SLC36A3Q495N2 470 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 WDTC1Q8N5D0 677 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 LILRB4Q8NHJ6 448 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 FEM1CQ96JP0 617 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 GLT1D1Q96MS3 346 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 EFHD1Q9BUP0 239 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 PCDHGA3Q9Y5H0 932 aa13.41□□□□□ -0.26
CALD1-205ENST00000422748 KCNU1A8MYU2 1149 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 SLC22A2O15244 555 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 BMP2P12643 396 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 TYK2P29597 1187 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 RAD23AP54725 363 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 BFSP2Q13515 415 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 FXNQ16595 210 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 INSCQ1MX18 579 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 SEL1L3Q68CR1 1132 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 CMC1Q7Z7K0 106 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 CCDC60Q8IWA6 550 aaPredicted RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 PLD6Q8N2A8 252 aaKnown RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 CLIP4Q8N3C7 705 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 CNTD1Q8N815 330 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 BPIFB6Q8NFQ5 453 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 CMASQ8NFW8 434 aaPredicted RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 SCYL1Q96KG9 808 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 RAD21L1Q9H4I0 556 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 DGKBQ9Y6T7 804 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 HNRNPDLO14979 420 aaKnown RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 HDAC3O15379 428 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 CHRNB1P11230 501 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 KRT3P12035 628 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 EEF1DP29692 281 aaKnown RBP13.4□□□□□ -0.26
CALD1-205ENST00000422748 ATICP31939 592 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 NR4A2P43354 598 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 PTPN9P43378 593 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 NIPAL4Q0D2K0 466 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 ABRAXAS1Q6UWZ7 409 aa13.4□□□□□ -0.26
CALD1-205ENST00000422748 RNF19BQ6ZMZ0 732 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms