RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 BECN2A8MW95 431 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 IRAK2O43187 625 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 CKMT1AP12532 417 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 PRKCHP24723 683 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 HOXA11P31270 313 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 ARRB2P32121 409 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 HTR6P50406 440 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 POLGP54098 1239 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 SELENOVP59797 346 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 ADCK5Q3MIX3 580 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 FBXO47Q5MNV8 452 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 SLC16A12Q6ZSM3 486 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 TRAPPC11Q7Z392 1133 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 CPOQ8IVL8 374 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 C7orf57Q8NEG2 295 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 HDAC7Q8WUI4 952 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 NSMCE1Q8WV22 266 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 FAR1Q8WVX9 515 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 CLSTN3Q9BQT9 956 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 RNF146Q9NTX7 359 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 CD207Q9UJ71 328 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 CDH22Q9UJ99 828 aa4.82□□□□□ -1.64
HMGB1P49-201ENST00000418882 VWA3AA6NCI4 1184 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 MYMKA6NI61 221 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 KCNAB3O43448 404 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 TMCC1O94876 653 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 HLA-DQA2P01906 255 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 ALPLP05186 524 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 CNPP09543 421 aaKnown RBP4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 CHRNB2P17787 502 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 SCP2P22307 547 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 PPP3CCP48454 512 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 FHL1Q13642 323 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 DUSP6Q16828 381 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 CTXN3Q4LDR2 81 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 Q5PR19 223 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 UBAP2Q5T6F2 1119 aaKnown RBP4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 PARM1Q6UWI2 310 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 WDR5BQ86VZ2 330 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 HORMAD2Q8N7B1 307 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 LPAR1Q92633 364 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 PPP1R10Q96QC0 940 aaKnown RBP4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 ISCUQ9H1K1 167 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 RRP7AQ9Y3A4 280 aaKnown RBP4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 RAP2CQ9Y3L5 183 aa4.81□□□□□ -1.64
HMGB1P49-201ENST00000418882 CCNT1O60563 726 aaKnown RBP4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 CLDN7O95471 211 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 LCATP04180 440 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 CPA1P15085 419 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 TBXAS1P24557 533 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 HNF1BP35680 557 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 GJC1P36383 396 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 CCR5P51681 352 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 DHX8Q14562 1220 aaKnown RBP4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 RPE65Q16518 533 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 DAB2IPQ5VWQ8 1189 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 AADACL2Q6P093 401 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 IGFN1Q86VF2 1251 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 SAMD14Q8IZD0 417 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 DPP10Q8N608 796 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 B4GALNT2Q8NHY0 566 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 PYM1Q9BRP8 204 aaKnown RBP4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 LMAN2LQ9H0V9 348 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 KLHL31Q9H511 634 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 STN1Q9H668 368 aaKnown RBP4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 TASP1Q9H6P5 420 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 RAI2Q9Y5P3 530 aa4.8□□□□□ -1.64
HMGB1P49-201ENST00000418882 FAM90A7PA6NKC0 464 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 FAM90A22PA8MWA6 464 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 FAM90A12PA8MX19 464 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 FAM90A23PA8MXZ1 464 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 STMND1H3BQB6 276 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 KLK10O43240 276 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 OAZ2O95190 189 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 KLKB1P03952 638 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 RASSF2P50749 326 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 PMS2P54278 862 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 PPFIA1Q13136 1202 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 EFR3AQ14156 821 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 DENND1BQ6P3S1 775 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 GJB7Q6PEY0 223 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 Q6ZSV7 163 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 GABPB2Q8TAK5 448 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 CEP76Q8TAP6 659 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 OIT3Q8WWZ8 545 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 APOLD1Q96LR9 279 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 IFT27Q9BW83 186 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 PHF7Q9BWX1 381 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 MRPL44Q9H9J2 332 aaKnown RBP4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 PLAC1Q9HBJ0 212 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 SAGE1Q9NXZ1 904 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
HMGB1P49-201ENST00000418882 TRIP12Q14669 1992 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 A0A1B0GVT2 93 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 OR6C68A6NDL8 312 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 INAFM1C9JVW0 142 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms