RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 GP1BAP07359 652 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 ITGA2BP08514 1039 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 FAM163BP0C2L3 166 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 FAM200BP0CF97 657 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 POLR2EP19388 210 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 NR1D1P20393 614 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 CASRP41180 1078 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 UBA7P41226 1012 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 MLLT10P55197 1068 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 ASIC1P78348 528 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 COG7P83436 770 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 CYP24A1Q07973 514 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 STAT4Q14765 748 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 TRIP4Q15650 581 aaPredicted RBP8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 MPPE1Q53F39 396 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 SLC45A4Q5BKX6 768 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 RBM44Q6ZP01 1051 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 C14orf80Q86SX3 495 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 PRPF39Q86UA1 669 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 APCDD1Q8J025 514 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 AHI1Q8N157 1196 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 CRYBG2Q8N1P7 616 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 ARL14Q8N4G2 192 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 TMEM145Q8NBT3 493 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 TTC17Q96AE7 1141 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 MIB2Q96AX9 1013 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 TMA16Q96EY4 203 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 TRIM11Q96F44 468 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 CALML4Q96GE6 196 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 FBRSQ9HAH7 460 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 NLGN3Q9NZ94 848 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 PNMA8BQ9ULN7 279 aaPredicted RBP8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 FZD4Q9ULV1 537 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 EXOC7Q9UPT5 735 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 ERVW-1Q9UQF0 538 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 USP3Q9Y6I4 520 aa8.94□□□□□ -0.98
NIF3L1-206ENST00000416651 CCDC187A0A096LP49 1063 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 PRAMEF33A0A0G2JMD5 474 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 A0A1W2PNR3 127 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 SCAMP1O15126 338 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 PRAMEF10O60809 474 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 IDEP14735 1019 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 ADH6P28332 368 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 MZF1P28698 734 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 AFMP43652 599 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 CYP2J2P51589 502 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 RIPPLY3P57055 190 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 TNP2Q05952 138 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 CNTN1Q12860 1018 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 TRPC3Q13507 836 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 PSMD6Q15008 389 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 MCTP1Q6DN14 999 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 NADSYN1Q6IA69 706 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 GCNT7Q6ZNI0 430 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 CCDC186Q7Z3E2 898 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 IQCHQ86VS3 1027 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 EDEM1Q92611 657 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 CYFIP2Q96F07 1278 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 PRICKLE1Q96MT3 831 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 SLC12A9Q9BXP2 914 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 DCLK3Q9C098 648 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 EPB41L5Q9HCM4 733 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 DNAJC28Q9NX36 388 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 PISDQ9UG56 409 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 SERTAD1Q9UHV2 236 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 SDK2Q58EX2 2172 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
NIF3L1-206ENST00000416651 A0A087X0B3 334 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 EME2A4GXA9 379 aaPredicted RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 PLD2O14939 933 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 RAD51BO15315 384 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 EPB41L2O43491 1005 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 PLRG1O43660 514 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 RNGTTO60942 597 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 GCATO75600 419 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 CLSTN1O94985 981 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 ATP5BP06576 529 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 FAM157BP0CG42 384 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 RALAP11233 206 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 ARSDP51689 593 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 POLE2P56282 527 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 RPS24P62847 133 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 DLG4P78352 724 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 KCNAB2Q13303 367 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 C1orf61Q13536 156 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 FZD2Q14332 565 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 TCEA2Q15560 299 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 SNRNP35Q16560 246 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 BMT2Q1RMZ1 405 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 ZNF699Q32M78 642 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 FAM133BQ5BKY9 247 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 PITRM1Q5JRX3 1037 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 NKAPLQ5M9Q1 402 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 MANEAQ5SRI9 462 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 SAMD5Q5TGI4 173 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 PIK3R6Q5UE93 754 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 AGBL4Q5VU57 503 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 XKR5Q6UX68 686 aa8.92□□□□□ -0.98
NIF3L1-206ENST00000416651 CENPQQ7L2Z9 268 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms