RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 DPH1Q9BZG8 443 aa15.79■□□□□ 0.12
DDX56-202ENST00000415758 POLR1BQ9H9Y6 1135 aa15.79■□□□□ 0.12
DDX56-202ENST00000415758 DDIT4Q9NX09 232 aa15.79■□□□□ 0.12
DDX56-202ENST00000415758 VPS28Q9UK41 221 aa15.79■□□□□ 0.12
DDX56-202ENST00000415758 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
DDX56-202ENST00000415758 LY6G6EA0A0G2JKS1 128 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 J3QKU1 62 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 FFAR2O15552 330 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 USP12O75317 370 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 LETM1O95202 739 aaPredicted RBP15.78■□□□□ 0.12
DDX56-202ENST00000415758 SRCP12931 536 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 KRT5P13647 590 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 PRLRP16471 622 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 AKT2P31751 481 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 CHRNA3P32297 505 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 DUSP3P51452 185 aaPredicted RBP15.78■□□□□ 0.12
DDX56-202ENST00000415758 GABREP78334 506 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 CENPCQ03188 943 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 PDCLQ13371 301 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 STIM1Q13586 685 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 TAF1BQ53T94 588 aaPredicted RBP15.78■□□□□ 0.12
DDX56-202ENST00000415758 EFHC1Q5JVL4 640 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 TTI2Q6NXR4 508 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 TMC6Q7Z403 805 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 TRIM59Q8IWR1 403 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 RNF34Q969K3 372 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 DUSP23Q9BVJ7 150 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 HDAC8Q9BY41 377 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 FAM204AQ9H8W3 233 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 GDPD2Q9HCC8 539 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 ASCL3Q9NQ33 180 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 GPR27Q9NS67 375 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 VANGL2Q9ULK5 521 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 ZFR2Q9UPR6 939 aaKnown RBP15.78■□□□□ 0.12
DDX56-202ENST00000415758 HS3ST4Q9Y661 456 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 HS3ST3A1Q9Y663 406 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 U3KQA8 63 aa15.78■□□□□ 0.12
DDX56-202ENST00000415758 TRPM6Q9BX84 2022 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 RIOK3O14730 519 aaKnown RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 HSF2BPO75031 334 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 CSO75390 466 aaKnown RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 MT-CO1P00395 513 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 PRNPP04156 253 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 IRAK1P51617 712 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 CDH4P55283 916 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 MARSP56192 900 aaKnown RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 KRT83P78385 493 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 TMEM259Q4ZIN3 620 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 GCNT7Q6ZNI0 430 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 SLC22A18ASQ8N1D0 253 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 WDTC1Q8N5D0 677 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 KLK6Q92876 244 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 ARRDC3Q96B67 414 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 GRAMD1AQ96CP6 724 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 NAF1Q96HR8 494 aaKnown RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 CCDC114Q96M63 670 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 TIGD1Q96MW7 591 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 NOX5Q96PH1 765 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 PSMB7Q99436 277 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 CALN1Q9BXU9 219 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 INTS2Q9H0H0 1204 aaKnown RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 CPNE5Q9HCH3 593 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 UBE2TQ9NPD8 197 aaPredicted RBP15.77■□□□□ 0.12
DDX56-202ENST00000415758 EVA1BQ9NVM1 165 aa15.77■□□□□ 0.12
DDX56-202ENST00000415758 K7ESM1 405 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 KPNA3O00505 521 aaPredicted RBP15.76■□□□□ 0.11
DDX56-202ENST00000415758 THAP12O43422 761 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 BNIP3LO60238 219 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 GNA15P30679 374 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 CLCN6P51797 869 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 HNRNPKP61978 463 aaKnown RBP eCLIP15.76■□□□□ 0.11
DDX56-202ENST00000415758 SKOR1P84550 965 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 ARHGAP40Q5TG30 622 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 Q6ZSR6 202 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 ERN2Q76MJ5 926 aaKnown RBP15.76■□□□□ 0.11
DDX56-202ENST00000415758 ENOSF1Q7L5Y1 443 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 C14orf80Q86SX3 495 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 ELOA2Q8IYF1 753 aaPredicted RBP15.76■□□□□ 0.11
DDX56-202ENST00000415758 ATP11CQ8NB49 1132 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 KCNE4Q8WWG9 221 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 TTC9Q92623 222 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 BMFQ96LC9 184 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 CPXM1Q96SM3 734 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 MYOCQ99972 504 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 C2orf49Q9BVC5 232 aaPredicted RBP15.76■□□□□ 0.11
DDX56-202ENST00000415758 ABCG4Q9H172 646 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 FZD3Q9NPG1 666 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 ACP6Q9NPH0 428 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 THSD1Q9NS62 852 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 CSNK1G3Q9Y6M4 447 aa15.76■□□□□ 0.11
DDX56-202ENST00000415758 COL27A1Q8IZC6 1860 aaPredicted RBP15.76■□□□□ 0.11
DDX56-202ENST00000415758 SYNJ2BP-COX16A0A087WUM0 186 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 A6NNZ2 444 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 K7ERQ8 282 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 RNF103O00237 685 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 PAGE1O75459 146 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 PCDH8O95206 1070 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 GNA14O95837 355 aa15.75■□□□□ 0.11
DDX56-202ENST00000415758 AFPP02771 609 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms