RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ARID3BQ8IVW6 561 aaPredicted RBP5.13□□□□□ -1.59
VPS41-205ENST00000414632 UBALD2Q8IYN6 164 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 NUP93Q8N1F7 819 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 CRYBG2Q8N1P7 616 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 Q8N1Y9 231 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 ZNF610Q8N9Z0 462 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 LEMD2Q8NC56 503 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 ZMIZ2Q8NF64 920 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 FLCNQ8NFG4 579 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 LMO3Q8TAP4 145 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 PIP4K2CQ8TBX8 421 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 SH3RF2Q8TEC5 729 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 MRPS31Q92665 395 aaKnown RBP5.13□□□□□ -1.59
VPS41-205ENST00000414632 SMARCD2Q92925 531 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 FBXO32Q969P5 355 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 CYFIP2Q96F07 1278 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 ASIC4Q96FT7 647 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 SMARCD1Q96GM5 515 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 TMEM176AQ96HP8 235 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 NT5C1BQ96P26 610 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 LRRC3BQ96PB8 259 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 C1QTNF1Q9BXJ1 281 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 SLC46A2Q9BY10 475 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 ZDHHC5Q9C0B5 715 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 INTS2Q9H0H0 1204 aaKnown RBP5.13□□□□□ -1.59
VPS41-205ENST00000414632 VPS16Q9H269 839 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 MFSD1Q9H3U5 465 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 EPB41L1Q9H4G0 881 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 CYP3A43Q9HB55 503 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 SP110Q9HB58 689 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 DMAP1Q9NPF5 467 aaPredicted RBP5.13□□□□□ -1.59
VPS41-205ENST00000414632 ACP6Q9NPH0 428 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 GDE1Q9NZC3 331 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 HSFX1Q9UBD0 423 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 TNFRSF10DQ9UBN6 386 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 DUSP12Q9UNI6 340 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 COA3Q9Y2R0 106 aaPredicted RBP5.13□□□□□ -1.59
VPS41-205ENST00000414632 COQ4Q9Y3A0 265 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 NFE2L3Q9Y4A8 694 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 PCDHB4Q9Y5E5 795 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 ZFP37Q9Y6Q3 630 aaPredicted RBP5.13□□□□□ -1.59
VPS41-205ENST00000414632 ATP8B3O60423 1300 aa5.13□□□□□ -1.59
VPS41-205ENST00000414632 ZNF318Q5VUA4 2279 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 DMDP11532 3685 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 SYCE3A1L190 88 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 KLHL33A6NCF5 533 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 FADS2P1A8MWK0 482 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 SCDO00767 359 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 PI15O43692 258 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 ECI2O75521 394 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 FAM163BP0C2L3 166 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 IRF1P10914 325 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 KRT5P13647 590 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 ACO1P21399 889 aaKnown RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 PTX3P26022 381 aaPredicted RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 AVPR1AP37288 418 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 USP8P40818 1118 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 GPR3P46089 330 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 KLK7P49862 253 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 SLC5A3P53794 718 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 CETN1Q12798 172 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 GTF2H3Q13889 308 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 PDCD1Q15116 288 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 CPSF6Q16630 551 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS41-205ENST00000414632 MAN2A1Q16706 1144 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 MINDY4Q4G0A6 757 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 VWA3BQ502W6 1294 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 MIIPQ5JXC2 388 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TRIM68Q6AZZ1 485 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TRIM65Q6PJ69 517 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 FOXR2Q6PJQ5 311 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 GBP6Q6ZN66 633 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TTC30AQ86WT1 665 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 YAF2Q8IY57 180 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 CMTM8Q8IZV2 173 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 AOPEPQ8N6M6 819 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 ARL14EPQ8N8R7 260 aaPredicted RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 UBA3Q8TBC4 463 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 USP33Q8TEY7 942 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TFAP2BQ92481 460 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 NDRG1Q92597 394 aaKnown RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 USP13Q92995 863 aaPredicted RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 ELSPBP1Q96BH3 223 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 CLIP3Q96DZ5 547 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 HSPBAP1Q96EW2 488 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 MAP6Q96JE9 813 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 SPATA17Q96L03 361 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 JMJD8Q96S16 334 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 SPOCK3Q9BQ16 436 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 ZSWIM1Q9BR11 485 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TUBGCP2Q9BSJ2 902 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 THAP9Q9H5L6 903 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TASP1Q9H6P5 420 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 BRD9Q9H8M2 597 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 ZFP14Q9HCL3 533 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 UBE2TQ9NPD8 197 aaPredicted RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 ACSS2Q9NR19 701 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 ARHGEF3Q9NR81 526 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 HEBP1Q9NRV9 189 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms