RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MPOP05164 745 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 GGCXP38435 758 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 LSSP48449 732 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 PCBP4P57723 403 aaKnown RBP12.47□□□□□ -0.41
LIMS2-210ENST00000413578 ERVPABLB-1P60509 514 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 DAB2P98082 770 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 MTA1Q13330 715 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 ACCSLQ4AC99 568 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 OLFML1Q6UWY5 402 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF683Q8IZ20 524 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 FAM181AQ8N9Y4 354 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 APOLD1Q96LR9 279 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 CPXM1Q96SM3 734 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 LGMNQ99538 433 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 INTS2Q9H0H0 1204 aaKnown RBP12.47□□□□□ -0.41
LIMS2-210ENST00000413578 USP29Q9HBJ7 922 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 FZD3Q9NPG1 666 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 ASCL3Q9NQ33 180 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 ANLNQ9NQW6 1124 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 VPS28Q9UK41 221 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 VANGL2Q9ULK5 521 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 COL6A6A6NMZ7 2263 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 MYLKQ15746 1914 aa12.47□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 A0A1W2PNU3 283 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 K7ERQ8 282 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 SCAMP1O15126 338 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 FFAR2O15552 330 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 MED7O43513 233 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 SMAD6O43541 496 aaKnown RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 SNAP91O60641 907 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 HSF2BPO75031 334 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 PAGE1O75459 146 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 CNTN5O94779 1100 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 KRT5P13647 590 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 HNRNPA2B1P22626 353 aaKnown RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 GNA15P30679 374 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 AKT2P31751 481 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 CHRNA3P32297 505 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 PPP1R2P41236 205 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 CDH4P55283 916 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 GABREP78334 506 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 SKOR1P84550 965 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 RHDQ02161 417 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 ZNF177Q13360 481 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 TMC6Q7Z403 805 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 ELOA2Q8IYF1 753 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 CHST14Q8NCH0 376 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 KLK6Q92876 244 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 BMFQ96LC9 184 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 DEPDC7Q96QD5 511 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 MYOCQ99972 504 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 HDAC8Q9BY41 377 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 POLR1BQ9H9Y6 1135 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 UBE2TQ9NPD8 197 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-210ENST00000413578 VPS51Q9UID3 782 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 MAN1B1Q9UKM7 699 aa12.46□□□□□ -0.41
LIMS2-210ENST00000413578 SYNJ2BP-COX16A0A087WUM0 186 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 K7ESM1 405 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 THAP12O43422 761 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 USP12O75317 370 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 ZNF821O75541 412 aaPredicted RBP12.45□□□□□ -0.42
LIMS2-210ENST00000413578 GRAP2O75791 330 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 AFPP02771 609 aaKnown RBP12.45□□□□□ -0.42
LIMS2-210ENST00000413578 MYF5P13349 255 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 ZNF18P17022 549 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 RRM1P23921 792 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 CLCN6P51797 869 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 UCNP55089 124 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 TMPRSS3P57727 454 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 CLDN2P57739 230 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 STIM1Q13586 685 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 FGL2Q14314 439 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 ALFQ53S48 1182 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 SEL1L3Q68CR1 1132 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 KYAT3Q6YP21 454 aaKnown RBP12.45□□□□□ -0.42
LIMS2-210ENST00000413578 FAM183BPQ6ZVS7 135 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 ERN2Q76MJ5 926 aaKnown RBP12.45□□□□□ -0.42
LIMS2-210ENST00000413578 SLC26A9Q7LBE3 791 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 DCAF4L2Q8NA75 395 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 FAM174AQ8TBP5 190 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 TTC9Q92623 222 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 PPP1R13BQ96KQ4 1090 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 SEMA4CQ9C0C4 833 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 CPNE5Q9HCH3 593 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 ARHGEF38Q9NXL2 777 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 COX16Q9P0S2 106 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 ZNF212Q9UDV6 495 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 PCDHGC3Q9UN70 934 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 HS3ST3A1Q9Y663 406 aa12.45□□□□□ -0.42
LIMS2-210ENST00000413578 A0A0D9SEW6 157 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 DRGXA6NNA5 263 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 A6NNZ2 444 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 KPNA3O00505 521 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms