RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TCAF2A6NFQ2 919 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 SOCS7O14512 581 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 RNASEH2AO75792 299 aaKnown RBP17.92■□□□□ 0.46
SDCBP-202ENST00000413219 DDHD2O94830 711 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 VAPBO95292 243 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 AMHP03971 560 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 SBK3P0C264 359 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 DPEP1P16444 411 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 SULT1E1P49888 294 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 KIZQ2M2Z5 673 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 MGAT5BQ3V5L5 792 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 KCTD11Q693B1 232 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
SDCBP-202ENST00000413219 MICALL2Q8IY33 904 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 MIPOL1Q8TD10 442 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 DIS3LQ8TF46 1054 aaKnown RBP17.92■□□□□ 0.46
SDCBP-202ENST00000413219 GAB3Q8WWW8 586 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 OSBPL11Q9BXB4 747 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 SQORQ9Y6N5 450 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 DAB1O75553 588 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 PTPN3P26045 913 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 ERI1Q8IV48 349 aaKnown RBP17.92■□□□□ 0.46
SDCBP-202ENST00000413219 NUP93Q8N1F7 819 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 CRYBG2Q8N1P7 616 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 DNAAF3Q8N9W5 541 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 TSPAN14Q8NG11 270 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 OR6B3Q8NGW1 331 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 SPATC1LQ9H0A9 340 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 PLEKHA5Q9HAU0 1116 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 SETD4Q9NVD3 440 aa17.92■□□□□ 0.46
SDCBP-202ENST00000413219 G3BP2Q9UN86 482 aaKnown RBP17.92■□□□□ 0.46
SDCBP-202ENST00000413219 COPG1Q9Y678 874 aaKnown RBP17.92■□□□□ 0.46
SDCBP-202ENST00000413219 A0A0J9YVX5 310 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TK2O00142 265 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 DCLK1O15075 740 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 MSX2P35548 267 aaPredicted RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 ALDH3B2P48448 385 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 GTF2A2P52657 109 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 NAGLUP54802 743 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 SULT2A1Q06520 285 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 ITGA7Q13683 1181 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 PTK2BQ14289 1009 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 OLFML2BQ68BL8 750 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 NXNQ6DKJ4 435 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 BNIPLQ7Z465 357 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 AMIGO2Q86SJ2 522 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 DEFB106AQ8N104 65 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 LSMEM2Q8N112 164 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 C7orf31Q8N865 590 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 EME1Q96AY2 570 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 DUS3LQ96G46 650 aaKnown RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 MAELQ96JY0 434 aaKnown RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 C20orf96Q9NUD7 363 aaPredicted RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 DNAAF2Q9NVR5 837 aaKnown RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 ERAP1Q9NZ08 941 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 RSL24D1Q9UHA3 163 aaKnown RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 SLC39A10Q9ULF5 831 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TRIP11Q15643 1979 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 PLXNA1Q9UIW2 1896 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TRPC5OSA6NMA1 111 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TARM1B6A8C7 271 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 H3BSA7 217 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 AP3B1O00203 1094 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 NCAM2O15394 837 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TSPAN1O60635 241 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 PFDN1O60925 122 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 CYP2B6P20813 491 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 PCSK6P29122 969 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 CDK9P50750 372 aaKnown RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 EMP3P54852 163 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TRIM25Q14258 630 aaKnown RBP17.91■□□□□ 0.46
SDCBP-202ENST00000413219 TMEM198Q66K66 360 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 RNF148Q8N7C7 305 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 NT5C3BQ969T7 300 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 MFSD3Q96ES6 412 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 PPP1R36Q96LQ0 422 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 BRD8Q9H0E9 1235 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 DPEP3Q9H4B8 488 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 LRRC4Q9HBW1 653 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 RNF11Q9Y3C5 154 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 AP4S1Q9Y587 144 aa17.91■□□□□ 0.46
SDCBP-202ENST00000413219 STX16-NPEPL1H3BU86 382 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 MTSS1O43312 755 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 NPHS1O60500 1241 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 YBX3P16989 372 aaKnown RBP eCLIP17.9■□□□□ 0.46
SDCBP-202ENST00000413219 DNAJB2P25686 324 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 ADORA2BP29275 332 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 POLD2P49005 469 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 TUBA4AP68366 448 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 TRAP1Q12931 704 aaKnown RBP17.9■□□□□ 0.46
SDCBP-202ENST00000413219 OLIG2Q13516 323 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 SLC12A1Q13621 1099 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 GRM3Q14832 879 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 OTUD1Q5VV17 481 aaPredicted RBP17.9■□□□□ 0.46
SDCBP-202ENST00000413219 IRAK1BP1Q5VVH5 260 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 ISLR2Q6UXK2 745 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 CARM1Q86X55 608 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 APOBEC3FQ8IUX4 373 aaKnown RBP17.9■□□□□ 0.46
SDCBP-202ENST00000413219 ACVR1CQ8NER5 493 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms