RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 GLT6D1Q7Z4J2 308 aa11.37□□□□□ -0.59
PTPRF-204ENST00000412568 SLC41A1Q8IVJ1 513 aa11.37□□□□□ -0.59
PTPRF-204ENST00000412568 AUTS2Q8WXX7 1259 aa11.37□□□□□ -0.59
PTPRF-204ENST00000412568 MAN1C1Q9NR34 630 aa11.37□□□□□ -0.59
PTPRF-204ENST00000412568 DTLQ9NZJ0 730 aa11.37□□□□□ -0.59
PTPRF-204ENST00000412568 MYH15Q9Y2K3 1946 aa11.37□□□□□ -0.59
PTPRF-204ENST00000412568 C2orf71A6NGG8 1288 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 NRP1O14786 923 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 ZNF189O75820 626 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 METTL18O95568 372 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 RGS4P49798 205 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 TRIP10Q15642 601 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 RNASEH2BQ5TBB1 312 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 SCARA3Q6AZY7 606 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 TRMT10BQ6PF06 316 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 TEKT4Q8WW24 435 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 PIGVQ9NUD9 493 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 MFHAS1Q9Y4C4 1052 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 C4AP0C0L4 1744 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 MEI4A8MW99 385 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 DNM1LO00429 736 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 MGEA5O60502 916 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CRTAMO95727 393 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CKBP12277 381 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 MAP4P27816 1152 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 SERPINH1P50454 418 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 WNT3AP56704 352 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 BST1Q10588 318 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 OLIG2Q13516 323 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CYTH1Q15438 398 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 TCEA2Q15560 299 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 RETSATQ6NUM9 610 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 AZIN2Q96A70 460 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 STRA6Q9BX79 667 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 POLR1EQ9GZS1 481 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CLPBQ9H078 707 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 NMRAL1Q9HBL8 299 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 SLC17A6Q9P2U8 582 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 DNMT3LQ9UJW3 386 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CEP290O15078 2479 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 DCXO43602 365 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 SH3BGRLO75368 114 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 VPS26AO75436 327 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 KATNA1O75449 491 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CALB2P22676 271 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 EEF1DP29692 281 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 NPY2RP49146 381 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 SEL1L3Q68CR1 1132 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 FUT10Q6P4F1 479 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 TDRD5Q8NAT2 981 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 GRIN3AQ8TCU5 1115 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 MRPL1Q9BYD6 325 aaKnown RBP11.36□□□□□ -0.59
PTPRF-204ENST00000412568 ABCG8Q9H221 673 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 PIF1Q9H611 641 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 CYTH4Q9UIA0 394 aa11.36□□□□□ -0.59
PTPRF-204ENST00000412568 FAM95CA0A1B0GW59 222 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 SYNDIG1LA6NDD5 238 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 CTPS1P17812 591 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 GATMP50440 423 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 PPM1JQ5JR12 505 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 WDTC1Q8N5D0 677 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 UROC1Q96N76 676 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 CATSPER2Q96P56 530 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 PPP1R2P1Q96PQ5 205 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 CERS4Q9HA82 394 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 WWOXQ9NZC7 414 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 SRRDQ9UH36 339 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 CHKBQ9Y259 395 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 STARD13Q9Y3M8 1113 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-204ENST00000412568 HEATR9A2RTY3 570 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 F8W8V4 182 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 ADCY6O43306 1168 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 TRIM13O60858 407 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 E2F6O75461 281 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 LYPLA1O75608 230 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-204ENST00000412568 GABRR2P28476 465 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 GPR15P49685 360 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 MRPS35P82673 323 aaKnown RBP11.35□□□□□ -0.59
PTPRF-204ENST00000412568 MED21Q13503 144 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 SPANXN3Q5MJ09 141 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 ZNF567Q8N184 647 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 HDAC10Q969S8 669 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 LRRC39Q96DD0 335 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 OXNAD1Q96HP4 312 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-204ENST00000412568 VAT1Q99536 393 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 TMEM109Q9BVC6 243 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 ADGRE3Q9BY15 652 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 IL22Q9GZX6 179 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 NCKIPSDQ9NZQ3 722 aa11.35□□□□□ -0.59
PTPRF-204ENST00000412568 WARS2Q9UGM6 360 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms