RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 NUCB1Q02818 461 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZBTB16Q05516 673 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 ABHD18Q0P651 414 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 CUL4AQ13619 759 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 RPE65Q16518 533 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 PLK5Q496M5 336 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 C5orf22Q49AR2 442 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 CERKLQ49MI3 558 aaPredicted RBP4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 C10orf76Q5T2E6 689 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 KRBA2Q6ZNG9 492 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 RBM44Q6ZP01 1051 aaKnown RBP4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF398Q8TD17 642 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 HSPH1Q92598 858 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 USP6NLQ92738 828 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 KAT2BQ92831 832 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 RITA1Q96K30 269 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 SYNCQ9H7C4 482 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 ENTPD7Q9NQZ7 604 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 HAUS2Q9NVX0 235 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 HCFC1R1Q9NWW0 138 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 SH3BP4Q9P0V3 963 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 HSPB7Q9UBY9 170 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 TBC1D29Q9UFV1 150 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 DHDHQ9UQ10 334 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 TNFSF13BQ9Y275 285 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 POLR2AP24928 1970 aaKnown RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 LDLRAD4O15165 306 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 SERPINC1P01008 464 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 FCGR2AP12318 317 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 KRT4P19013 534 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CDH2P19022 906 aaPredicted RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 ICAM3P32942 547 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 SKIV2L2P42285 1042 aaKnown RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CTCFP49711 727 aaPredicted RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CLK3P49761 638 aaKnown RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 NEXNQ0ZGT2 675 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 ACVR2BQ13705 512 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 AWAT1Q58HT5 328 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 ARL13AQ5H913 290 aaPredicted RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 FAM171A1Q5VUB5 890 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CDC73Q6P1J9 531 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CRIP3Q6Q6R5 217 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 GHDCQ8N2G8 530 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 NEK9Q8TD19 979 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 KLHL15Q96M94 604 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 TEFMQ96QE5 360 aaKnown RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 PIP5K1AQ99755 562 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 DUSP26Q9BV47 211 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 IFT27Q9BW83 186 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 FRMD8Q9BZ67 464 aaPredicted RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CPNE5Q9HCH3 593 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 GRHL1Q9NZI5 618 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 SERGEFQ9UGK8 458 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 LIMA1Q9UHB6 759 aaKnown RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 CDH22Q9UJ99 828 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 WNT6Q9Y6F9 365 aa4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 RSF1Q96T23 1441 aaPredicted RBP4.35□□□□□ -1.71
RNU2-28P-201ENST00000410457 TCRBV7S3A2A0A539 114 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PABPN1LA6NDY0 278 aaKnown RBP4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 TAF4O00268 1085 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 AP3D1O14617 1153 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 FOXN1O15353 648 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 RNF8O76064 485 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 DDAH2O95865 285 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PLAUP00749 431 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 ADAP00813 363 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 SPARCP09486 303 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF8P17098 575 aaPredicted RBP4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 FMO4P31512 558 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PLA2G5P39877 138 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PSMB10P40306 273 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PTPN9P43378 593 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 CYP4A11Q02928 519 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 NCEH1Q6PIU2 408 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 IL20RBQ6UXL0 311 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PRSS45Q7RTY3 260 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 GALNT5Q7Z7M9 940 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 CNTROBQ8N137 903 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 OR8H2Q8N162 312 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 AMER2Q8N7J2 671 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 BCAS4Q8TDM0 211 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 HDAC7Q8WUI4 952 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 IP6K1Q92551 441 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PIGKQ92643 395 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 FAM149B1Q96BN6 582 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 TM2D2Q9BX73 214 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 SLC32A1Q9H598 525 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PRKRIP1Q9H875 184 aaPredicted RBP4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 PCDHB16Q9NRJ7 776 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 ATP8A2Q9NTI2 1148 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 C20orf141Q9NUB4 165 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 SEPT11Q9NVA2 429 aaKnown RBP4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
RNU2-28P-201ENST00000410457 KIAA1456Q9P272 454 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms