RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 F5H423 210 aaPredicted RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 CBX4O00257 560 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 KDELR3O43731 214 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 SNAP91O60641 907 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 METTL18O95568 372 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ADH1CP00326 375 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 TNFRSF8P28908 595 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ECHS1P30084 290 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 DRG2P55039 364 aaKnown RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 SLC10A7Q0GE19 358 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 HTR4Q13639 388 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 PDGFRLQ15198 375 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 TEX44Q53QW1 395 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 IZUMO3Q5VZ72 239 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 MTSS1LQ765P7 747 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 YAF2Q8IY57 180 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 MAML1Q92585 1016 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 IL12RB2Q99665 862 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ABCB8Q9NUT2 735 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 KIAA1522Q9P206 1035 aaPredicted RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 NFU1Q9UMS0 254 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 MYLKQ15746 1914 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 DNALI1O14645 258 aaPredicted RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 OPHN1O60890 802 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ZNF189O75820 626 aaPredicted RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 CD68P34810 354 aaPredicted RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 ETFBP38117 255 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ITGA8P53708 1063 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ARF5P84085 180 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 GAB4Q2WGN9 574 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 SYCP2LQ5T4T6 812 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ZDHHC24Q6UX98 284 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 PID1Q7Z2X4 250 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 C12orf40Q86WS4 652 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 CNTD1Q8N815 330 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 FATE1Q969F0 183 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 TEKT5Q96M29 485 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 VAT1Q99536 393 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 RAB6BQ9NRW1 208 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 WHRNQ9P202 907 aa17.17■□□□□ 0.34
SSB-202ENST00000409333 INTS6Q9UL03 887 aaKnown RBP17.17■□□□□ 0.34
SSB-202ENST00000409333 ANHXE9PGG2 379 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 TRIM24O15164 1050 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 HOXC11O43248 304 aaPredicted RBP17.16■□□□□ 0.34
SSB-202ENST00000409333 CACNG3O60359 315 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 HLA-DQB2P05538 268 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 PSMB4P28070 264 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 GDI1P31150 447 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 BASP1P80723 227 aaKnown RBP17.16■□□□□ 0.34
SSB-202ENST00000409333 GAD2Q05329 585 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 CUL1Q13616 776 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 HNRNPDQ14103 355 aaKnown RBP17.16■□□□□ 0.34
SSB-202ENST00000409333 HLTFQ14527 1009 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSB-202ENST00000409333 PLEKHG6Q3KR16 790 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 LINGO4Q6UY18 593 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 CCNI2Q6ZMN8 369 aaPredicted RBP17.16■□□□□ 0.34
SSB-202ENST00000409333 TTC8Q8TAM2 541 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 CPT1BQ92523 772 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 LRRC45Q96CN5 670 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 RBM22Q9NW64 420 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSB-202ENST00000409333 GTSE1Q9NYZ3 720 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 VPS51Q9UID3 782 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 TPX2Q9ULW0 747 aaKnown RBP17.16■□□□□ 0.34
SSB-202ENST00000409333 HPCAL4Q9UM19 191 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 TTLL3Q9Y4R7 772 aa17.16■□□□□ 0.34
SSB-202ENST00000409333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 ZMPSTE24O75844 475 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 NFKB1P19838 968 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 PLTPP55058 493 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 CALCOCO2Q13137 446 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 FUT11Q495W5 492 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 PITRM1Q5JRX3 1037 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 DCAF4L2Q8NA75 395 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 FBXO25Q8TCJ0 367 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 ART4Q93070 314 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 GORASP1Q9BQQ3 440 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 ZDHHC18Q9NUE0 388 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 GGA2Q9UJY4 613 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 TRHDEQ9UKU6 1024 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 TCRBV7S3A2A0A539 114 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 CHADO15335 359 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 ITIH2P19823 946 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 MCM3P25205 808 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 MMP13P45452 471 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 RENBPP51606 427 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 RUNX3Q13761 415 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 LBRQ14739 615 aaKnown RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 RNASEH2BQ5TBB1 312 aaKnown RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 TMCO4Q5TGY1 634 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 MARC1Q5VT66 337 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 ANKRD22Q5VYY1 191 aa17.15■□□□□ 0.34
SSB-202ENST00000409333 HIBCHQ6NVY1 386 aaPredicted RBP17.15■□□□□ 0.34
SSB-202ENST00000409333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms