RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 AMFRQ9UKV5 643 aa25.91■■□□□ 1.74
TMEM55B-202ENST00000398020 PCDHA3Q9Y5H8 950 aa25.91■■□□□ 1.74
TMEM55B-202ENST00000398020 MYO15AQ9UKN7 3530 aa25.91■■□□□ 1.74
TMEM55B-202ENST00000398020 DMDP11532 3685 aa25.91■■□□□ 1.74
TMEM55B-202ENST00000398020 SIN3BO75182 1162 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 MAP3K6O95382 1288 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 CD160O95971 181 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 PGBD3Q8N328 593 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 LZTR1Q8N653 840 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 PRRX2Q99811 253 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 SUN2Q9UH99 717 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 ARHGAP42A6NI28 874 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 J3KR12 359 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 MFSD11O43934 449 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 BNIP3LO60238 219 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 GABRG2P18507 467 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 SERPINH1P50454 418 aaKnown RBP25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 DNA2P51530 1060 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 CAMK2GQ13555 558 aaPredicted RBP25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 Q6ZVU0 165 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 CCDC50Q8IVM0 306 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 PTPRN2Q92932 1015 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 MKRN2Q9H000 416 aaKnown RBP25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 FCF1Q9Y324 198 aaKnown RBP25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 HCN4Q9Y3Q4 1203 aa25.9■■□□□ 1.74
TMEM55B-202ENST00000398020 CCDC66A2RUB6 948 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 ATP9BO43861 1147 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 ALDH1A2O94788 518 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 ZRANB2O95218 330 aaKnown RBP eCLIP25.89■■□□□ 1.731e-7■■■■■ 26.8
TMEM55B-202ENST00000398020 KRT10P13645 584 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 NDUFV2P19404 249 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 CTNNA2P26232 953 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 SERPINB6P35237 376 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 CDKN2BP42772 138 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 DYNLT1P63172 113 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 C9orf64Q5T6V5 341 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 SPOCD1Q6ZMY3 1216 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 RFX6Q8HWS3 928 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 ALG3Q92685 438 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 MAK16Q9BXY0 300 aaKnown RBP25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 TNKS2Q9H2K2 1166 aa25.89■■□□□ 1.73
TMEM55B-202ENST00000398020 CACNA1HO95180 2353 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 EDDM13A0A1B0GTR0 161 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 PEX5P50542 639 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 COPAP53621 1224 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 GBE1Q04446 702 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 KAZNQ674X7 775 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 EXD1Q8NHP7 514 aa25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 TRMT1Q9NXH9 659 aaKnown RBP25.88■■□□□ 1.73
TMEM55B-202ENST00000398020 VASPP50552 380 aaPredicted RBP25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 PAFAH1B3Q15102 231 aaKnown RBP25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 ZNF528Q3MIS6 628 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 C22orf39Q6P5X5 142 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 RASSF3Q86WH2 238 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 VSIG1Q86XK7 387 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 RCOR2Q8IZ40 523 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 PLD5Q8N7P1 536 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 MRGPRX1Q96LB2 322 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 PYCARDQ9ULZ3 195 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 USP34Q70CQ2 3546 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 ZNF487B1APH4 448 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 HOXA6P31267 233 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 RWDD2BP57060 319 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 SLC20A2Q08357 652 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 KIAA1324Q6UXG2 1013 aaKnown RBP25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 TMPRSS6Q8IU80 811 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 REXO1L1PQ8IX06 675 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 OR2T3Q8NH03 318 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 RBM41Q96IZ5 413 aaKnown RBP25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 SP110Q9HB58 689 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 PDFQ9HBH1 243 aa25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 IPO11Q9UI26 975 aaKnown RBP25.87■■□□□ 1.73
TMEM55B-202ENST00000398020 AXIN1O15169 862 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 ZBTB24O43167 697 aaPredicted RBP25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 PRAMEF11O60813 436 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 ZNF821O75541 412 aaPredicted RBP25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 CLCN6P51797 869 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 NRLP54845 237 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 ADCY2Q08462 1091 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 TFDP3Q5H9I0 405 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 SLC9A4Q6AI14 798 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 AADACL2Q6P093 401 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 STK40Q8N2I9 435 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 LRRN4Q8WUT4 740 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 PRDM16Q9HAZ2 1276 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 EBF1Q9UH73 591 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 HEY1Q9Y5J3 304 aa25.86■■□□□ 1.73
TMEM55B-202ENST00000398020 TARSL2A2RTX5 802 aaKnown RBP25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 ZSCAN5CA6NGD5 496 aaPredicted RBP25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 APOL1O14791 398 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 ZSCAN12O43309 604 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 GEMIN4P57678 1058 aaKnown RBP25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 SLC10A2Q12908 348 aaPredicted RBP25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 TAZQ16635 292 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 NPNTQ6UXI9 565 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 LONP2Q86WA8 852 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 UBL4BQ8N7F7 174 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 NELL1Q92832 810 aa25.85■■□□□ 1.73
TMEM55B-202ENST00000398020 HES6Q96HZ4 224 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms