RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ELP3Q9H9T3 547 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SPC25Q9HBM1 224 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MRGBPQ9NV56 204 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 UBQLN1Q9UMX0 589 aaKnown RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PSMD3O43242 534 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CD4P01730 458 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MLNP12872 115 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NFKBIAP25963 317 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SLC7A2P52569 658 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FOXD4Q12950 439 aaPredicted RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PQLC3Q8N755 202 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DOLKQ9UPQ8 538 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ALDOAP04075 364 aaKnown RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ASLP04424 464 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NPY2RP49146 381 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 C21orf59P57076 290 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 KCNK10P57789 538 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TRAF2Q12933 501 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GRM1Q13255 1194 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GRM3Q14832 879 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TLR1Q15399 786 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CYP51A1Q16850 503 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GPR107Q5VW38 600 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 METTL23Q86XA0 190 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GIPC2Q8TF65 315 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ARAP2Q8WZ64 1704 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 IFT43Q96FT9 208 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 RBBP8Q99708 897 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DHRS4Q9BTZ2 278 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SLC25A23Q9BV35 468 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OSBPL11Q9BXB4 747 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MAGEB5Q9BZ81 275 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 C20orf27Q9GZN8 174 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SPATC1LQ9H0A9 340 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 POLR1BQ9H9Y6 1135 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TIMM13Q9Y5L4 95 aaPredicted RBP11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 STYXL1Q9Y6J8 313 aa11.29□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MDM4O15151 490 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SNX2O60749 519 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ANXA9O76027 345 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 LIMK2P53671 638 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NFYCQ13952 458 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ZNF567Q8N184 647 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PGLYRP2Q96PD5 576 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PKP2Q99959 881 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SP110Q9HB58 689 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PNPLA3Q9NST1 481 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 AAR2Q9Y312 384 aaKnown RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MFHAS1Q9Y4C4 1052 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CAPN14A8MX76 684 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SUPT3HB4E1H0 165 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 LTFP02788 710 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SNRPB2P08579 225 aaKnown RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OCM2P0CE71 109 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OCMP0CE72 109 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HADHAP40939 763 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CCR10P46092 362 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 LSAMPQ13449 338 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ZNF460Q14592 562 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 BTBD8Q5XKL5 378 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MAP1SQ66K74 1059 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TRIM74Q86UV6 250 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TRIM73Q86UV7 250 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 RIN3Q8TB24 985 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OXCT2Q9BYC2 517 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 IL22Q9GZX6 179 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ARHGEF4Q9NR80 690 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SETD4Q9NVD3 440 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NUMBLQ9Y6R0 609 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FAM149AA5PLN7 773 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CKMT2P17540 419 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CDH15P55291 814 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 RBBP7Q16576 425 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PLD6Q8N2A8 252 aaKnown RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DHRSXQ8N5I4 330 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CALML6Q8TD86 181 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MAGEE2Q8TD90 523 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OSMRQ99650 979 aa11.28□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CLK4Q9HAZ1 481 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms