RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 TMEM79Q9BSE2 394 aa17.64■□□□□ 0.41
EWSR1-206ENST00000397938 TASP1Q9H6P5 420 aa17.64■□□□□ 0.41
EWSR1-206ENST00000397938 PLGRKTQ9HBL7 147 aa17.64■□□□□ 0.41
EWSR1-206ENST00000397938 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
EWSR1-206ENST00000397938 C20orf96Q9NUD7 363 aaPredicted RBP17.64■□□□□ 0.41
EWSR1-206ENST00000397938 ADA2Q9NZK5 511 aa17.64■□□□□ 0.41
EWSR1-206ENST00000397938 CABYRO75952 493 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 CSPG5O95196 566 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 HMGCS2P54868 508 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 CSE1LP55060 971 aaKnown RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 IFRD2Q12894 506 aaPredicted RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 MPP3Q13368 585 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 TRIM25Q14258 630 aaKnown RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 KRT80Q6KB66 452 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 SLC26A9Q7LBE3 791 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 TRIM50Q86XT4 487 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 SMYD1Q8NB12 490 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 TOP1MTQ969P6 601 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 MCMBPQ9BTE3 642 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 UTP6Q9NYH9 597 aaKnown RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 RRN3Q9NYV6 651 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 PCDHGA7Q9Y5G6 932 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 SH3PXD2BA1X283 911 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 STAU1O95793 577 aaKnown RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 HSPA1AP0DMV8 641 aaKnown RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 HSPA1BP0DMV9 641 aaKnown RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 FGFR3P22607 806 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 NAGLUP54802 743 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 PSME3P61289 254 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 RHDQ02161 417 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 TMEM132DQ14C87 1099 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 Q6ZNX1 250 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 PTAR1Q7Z6K3 402 aaPredicted RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 EXOC8Q8IYI6 725 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 LSMEM2Q8N112 164 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 MYO1HQ8N1T3 1032 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 ZNF280CQ8ND82 737 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 VPS39Q96JC1 886 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 C1QTNF1Q9BXJ1 281 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 RCOR3Q9P2K3 495 aaPredicted RBP17.63■□□□□ 0.41
EWSR1-206ENST00000397938 VANGL2Q9ULK5 521 aa17.63■□□□□ 0.41
EWSR1-206ENST00000397938 BMP10O95393 424 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 STT3AP46977 705 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 CSRP3P50461 194 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 NUP107P57740 925 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 SNX16P57768 344 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 RBP5P82980 135 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 SOWAHAQ2M3V2 549 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 SLC10A6Q3KNW5 377 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 ACOT1Q86TX2 421 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 FIBCD1Q8N539 461 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 C12orf42Q96LP6 360 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 OSBPL6Q9BZF3 934 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 TRPV6Q9H1D0 765 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 MYOZ2Q9NPC6 264 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 ANKRD6Q9Y2G4 727 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 FAM155AB1AL88 458 aaPredicted RBP17.62■□□□□ 0.41
EWSR1-206ENST00000397938 MCF2P10911 925 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 MTX3Q5HYI7 312 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 SLC29A1Q99808 456 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 ANKRD60Q9BZ19 345 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 PCDHAC1Q9H158 963 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 MRPL40Q9NQ50 206 aaKnown RBP17.62■□□□□ 0.41
EWSR1-206ENST00000397938 IPO11Q9UI26 975 aaKnown RBP17.62■□□□□ 0.41
EWSR1-206ENST00000397938 SH3GLB1Q9Y371 365 aa17.62■□□□□ 0.41
EWSR1-206ENST00000397938 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 USP12O75317 370 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 ENTPD1P49961 510 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 TNFAIP2Q03169 654 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 PDAP1Q13442 181 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 TREML2Q5T2D2 321 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 GK5Q6ZS86 529 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 LZTR1Q8N653 840 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 CCNYQ8ND76 341 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 TRAPPC12Q8WVT3 735 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 SLCO4A1Q96BD0 722 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 UHRF1Q96T88 793 aaPredicted RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 BFARQ9NZS9 450 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 KCNU1A8MYU2 1149 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 YBX3P16989 372 aaKnown RBP eCLIP17.61■□□□□ 0.415e-9■■□□□ 12.8
EWSR1-206ENST00000397938 TNFAIP1Q13829 316 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 ANO4Q32M45 955 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 PATL1Q86TB9 770 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 KCNMB4Q86W47 210 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 PCDH20Q8N6Y1 951 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 DUS3LQ96G46 650 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 MAELQ96JY0 434 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 MRPL45Q9BRJ2 306 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 UNC93B1Q9H1C4 597 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 PRDM12Q9H4Q4 367 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 CLK4Q9HAZ1 481 aaKnown RBP17.61■□□□□ 0.41
EWSR1-206ENST00000397938 DPP3Q9NY33 737 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 SLC39A10Q9ULF5 831 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 FZD10Q9ULW2 581 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 SLC8A2Q9UPR5 921 aa17.61■□□□□ 0.41
EWSR1-206ENST00000397938 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms