RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 GLOD4Q9HC38 313 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 SYTL2Q9HCH5 934 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 PKD2L2Q9NZM6 624 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 CPSF2Q9P2I0 782 aaKnown RBP8.42□□□□□ -1.06
PTPRD-204ENST00000397606 ABLIM1O14639 778 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 KIAA0355O15063 1070 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 MAP3K13O43283 966 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 CA3P07451 260 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 CD48P09326 243 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 HOXB8P17481 243 aaPredicted RBP8.42□□□□□ -1.06
PTPRD-204ENST00000397606 HLA-DPA1P20036 260 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 FGFR3P22607 806 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 ATXN1P54253 815 aaKnown RBP8.42□□□□□ -1.06
PTPRD-204ENST00000397606 DSG1Q02413 1049 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 TCEAL1Q15170 157 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 TMC3Q7Z5M5 1100 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 KCNMB4Q86W47 210 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 OR52K1Q8NGK4 314 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 GRIN3AQ8TCU5 1115 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 FNIP2Q9P278 1114 aa8.42□□□□□ -1.06
PTPRD-204ENST00000397606 DGKIO75912 1065 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 VAPBO95292 243 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 SYF2O95926 243 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 H2AFXP16104 143 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ZNF7P17097 686 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 GP5P40197 560 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 CXCR3P49682 368 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 NAB1Q13506 487 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 LRRC14Q15048 493 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 FAM47EQ6ZV65 393 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TMCO2Q7Z6W1 182 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 CELF5Q8N6W0 485 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 PCDH19Q8TAB3 1148 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 OR8D1Q8WZ84 308 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 E2F7Q96AV8 911 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 OMDQ99983 421 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 CACYBPQ9HB71 228 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TDP1Q9NUW8 608 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ADAM21Q9UKJ8 722 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 WDR90Q96KV7 1748 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 A0A1W2PQ67 120 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 RIPK2O43353 540 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ZWINTO95229 277 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 FGF1P05230 155 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ITGB1P05556 798 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 MYL2P10916 166 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 CD151P48509 253 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 MLLT6P55198 1093 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 FAM189BP81408 668 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TRADDQ15628 312 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 SPDYCQ5MJ68 293 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 DUPD1Q68J44 220 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 OTOP3Q7RTS5 596 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TTC7BQ86TV6 843 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 KLHL5Q96PQ7 755 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 GKN1Q9NS71 199 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 R3HDM2Q9Y2K5 976 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 DLEC1Q9Y238 1755 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 MATN3O15232 486 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TNFRSF8P28908 595 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 PEX5P50542 639 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 MAXP61244 160 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 HNRNPDQ14103 355 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ACOX1Q15067 660 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ARCQ7LC44 396 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 GRASPQ7Z6J2 395 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TUBB6Q9BUF5 446 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 PIH1D1Q9NWS0 290 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 APOBEC2Q9Y235 224 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 GLRA3O75311 464 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TSHRP16473 764 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 WNT3AP56704 352 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 IL10RBQ08334 325 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ZSCAN26Q16670 478 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 IMPG1Q17R60 797 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 DRICH1Q6PGQ1 229 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 POTEHQ6S545 545 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 CHST9Q7L1S5 443 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 ZNF598Q86UK7 904 aaKnown RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TBC1D19Q8N5T2 526 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 EXOC2Q96KP1 924 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 KLF6Q99612 283 aaPredicted RBP8.41□□□□□ -1.06
PTPRD-204ENST00000397606 SFXN1Q9H9B4 322 aa8.41□□□□□ -1.06
PTPRD-204ENST00000397606 IL1BP01584 269 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 KRT4P19013 534 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 ADRA1DP25100 572 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 DGKGP49619 791 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 CDK7P50613 346 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 C12orf50Q8NA57 414 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 N4BP2L2Q92802 583 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-204ENST00000397606 GRAMD1AQ96CP6 724 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 NKX2-4Q9H2Z4 354 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 NINJ2Q9NZG7 142 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 CD274Q9NZQ7 290 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 DCDC2Q9UHG0 476 aa8.4□□□□□ -1.06
PTPRD-204ENST00000397606 ACOT9Q9Y305 439 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms