RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 NR5A2O00482 541 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 CLIC3O95833 236 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 MPP1Q00013 466 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 MS4A2Q01362 244 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 MAP3K10Q02779 954 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 ATP1A4Q13733 1029 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 MYLK3Q32MK0 819 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 ZNF618Q5T7W0 954 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 RNF168Q8IYW5 571 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 APPL2Q8NEU8 664 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 AFG1LQ8WV93 481 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 FCRL3Q96P31 734 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 SIKE1Q9BRV8 207 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 RTKNQ9BST9 563 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 SPATC1LQ9H0A9 340 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 NDUFA13Q9P0J0 144 aa14.96□□□□□ -0.01
RAPGEF4-201ENST00000397081 CCNT2O60583 730 aaKnown RBP14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 ARRB2P32121 409 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 CDH5P33151 784 aaPredicted RBP14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 PPARGP37231 505 aaPredicted RBP14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 CXCR3P49682 368 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 PSME3P61289 254 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 NCBP2-AS2Q69YL0 99 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 OTOP3Q7RTS5 596 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 GPC2Q8N158 579 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 NXNL1Q96CM4 212 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 POMKQ9H5K3 350 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 STK39Q9UEW8 545 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 TNFSF13BQ9Y275 285 aa14.96□□□□□ -0.02
RAPGEF4-201ENST00000397081 DDHD2O94830 711 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 STMN1P16949 149 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 NMBRP28336 390 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 FASTKQ14296 549 aaKnown RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TTLL4Q14679 1199 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 ZNF470Q6ECI4 717 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TMIGD2Q96BF3 282 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 RMND5BQ96G75 393 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 SORT1Q99523 831 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 R3HDMLQ9H3Y0 253 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 UBAP1Q9NZ09 502 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 PCDHB12Q9Y5F1 795 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 SOWAHBA6NEL2 793 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 C19orf81C9J6K1 198 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TIMM44O43615 452 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 GCATO75600 419 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 PTPN1P18031 435 aaKnown RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 LSAMPQ13449 338 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 CMPK2Q5EBM0 449 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 OTUD3Q5T2D3 398 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 OLFML1Q6UWY5 402 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 SH2D5Q6ZV89 423 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 DSEQ9UL01 958 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TRMUO75648 421 aaKnown RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 JUNP05412 331 aaKnown RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 BST2Q10589 180 aaKnown RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 PRKAA1Q13131 559 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 DCTN2Q13561 401 aaKnown RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 KLC3Q6P597 504 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 LDB1Q86U70 411 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 OR9I1Q8NGQ6 314 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 ACMSDQ8TDX5 336 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 SEPHS2Q99611 448 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 NAT9Q9BTE0 207 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 C1orf21Q9H246 121 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 DNAJC28Q9NX36 388 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 C6orf203Q9P0P8 240 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 CDK5RAP2Q96SN8 1893 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 FZD9O00144 591 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 PDLIM1O00151 329 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 MT-CYBP00156 380 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TFPTP0C1Z6 253 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TPSB2P20231 275 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 NR2C2P49116 596 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 MTTPP55157 894 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 CEACAM7Q14002 265 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TPSAB1Q15661 275 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 ACBD5Q5T8D3 534 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 DRAXINQ8NBI3 349 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 FTHL17Q9BXU8 183 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 CXCL16Q9H2A7 254 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 PNPLA8Q9NP80 782 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 SETD4Q9NVD3 440 aa14.95□□□□□ -0.02
RAPGEF4-201ENST00000397081 TNS1Q9HBL0 1735 aaKnown RBP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 UBDO15205 165 aa14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 ASLP04424 464 aa14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 PABPC4LP0CB38 370 aaKnown RBP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 HSPA8P11142 646 aaKnown RBP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 TKTL1P51854 596 aa14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 BCAT1P54687 386 aa14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 ZNF280AP59817 542 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 TWF2Q6IBS0 349 aaKnown RBP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 CHST13Q8NET6 341 aa14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 QKIQ96PU8 341 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 GPR20Q99678 358 aa14.94□□□□□ -0.02
RAPGEF4-201ENST00000397081 CCDC90BQ9GZT6 254 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms