RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TMEM35BQ8NCS4 154 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 OR52K2Q8NGK3 314 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 GANCQ8TET4 914 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 IGSF8Q969P0 613 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 SERPINB11Q96P15 392 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 NOX5Q96PH1 765 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 CCDC86Q9H6F5 360 aaKnown RBP10.64□□□□□ -0.71
NEDD8-202ENST00000396828 CAAP1Q9H8G2 361 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 TRMT1Q9NXH9 659 aaKnown RBP10.64□□□□□ -0.71
NEDD8-202ENST00000396828 INTUQ9ULD6 942 aa10.64□□□□□ -0.71
NEDD8-202ENST00000396828 A0A1B0GTQ1 180 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 A0A1W2PPC4 97 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TRABD2BA6NFA1 517 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TRUB2O95900 331 aaKnown RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 H2AFZP0C0S5 128 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TACR2P21452 398 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 SLC8A1P32418 973 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 PSMD8P48556 350 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 CCT8P50990 548 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 ST8SIA6P61647 398 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 RACK1P63244 317 aaKnown RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 CDH18Q13634 790 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TEAD4Q15561 434 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TTC31Q49AM3 519 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 ACAD10Q6JQN1 1059 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 DHRS13Q6UX07 377 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 USP30Q70CQ3 517 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 H2AFVQ71UI9 128 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TMEM110Q86TL2 294 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 PASD1Q8IV76 773 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 MSANTD4Q8NCY6 345 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 HNRNPLLQ8WVV9 542 aaKnown RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 CTNNBL1Q8WYA6 563 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 GOLGA1Q92805 767 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 TRIM11Q96F44 468 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 CRELD1Q96HD1 420 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 PPP1R13BQ96KQ4 1090 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 PCDHB18PQ96TA0 734 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 CDC6Q99741 560 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 IRX2Q9BZI1 471 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 ISCUQ9H1K1 167 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 FBRSQ9HAH7 460 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 SARDHQ9UL12 918 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 REXO2Q9Y3B8 237 aaKnown RBP10.63□□□□□ -0.71
NEDD8-202ENST00000396828 ATMQ13315 3056 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 MGAQ8IWI9 3026 aa10.63□□□□□ -0.71
NEDD8-202ENST00000396828 URB1O60287 2271 aaKnown RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 SYNJ2BP-COX16A0A087WUM0 186 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 A0A1W2PR77 199 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 TARSL2A2RTX5 802 aaKnown RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 ANKRD62A6NC57 917 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 RNF103O00237 685 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 VILLO15195 856 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 TNFSF14O43557 240 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 PCDHGA12O60330 932 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 GRAP2O75791 330 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 FTLP02792 175 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 ASLP04424 464 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 CYP1A1P04798 512 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 TMEM253P0C7T8 217 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 MYBL1P10243 752 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 UNGP13051 313 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 PDGFRAP16234 1089 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 DRD3P35462 400 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 GGCXP38435 758 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 GRK6P43250 576 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 SNX16P57768 344 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 PPP2CBP62714 309 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 YWHAZP63104 245 aaKnown RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 PPP2CAP67775 309 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 ECT2LQ008S8 904 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 CENPCQ03188 943 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 CYP4F3Q08477 520 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 DNAJC3Q13217 504 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 PDCLQ13371 301 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 NNTQ13423 1086 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 SUZ12Q15022 739 aaKnown RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 NAA35Q5VZE5 725 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 CXorf57Q6NSI4 855 aaKnown RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 ZNF662Q6ZS27 426 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 ADAT2Q7Z6V5 191 aaKnown RBP10.62□□□□□ -0.71
NEDD8-202ENST00000396828 CHSY1Q86X52 802 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 CPA5Q8WXQ8 436 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 ALG14Q96F25 216 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 OMDQ99983 421 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 LZTFL1Q9NQ48 299 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 COX16Q9P0S2 106 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 NENFQ9UMX5 172 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 NCKAP1Q9Y2A7 1128 aa10.62□□□□□ -0.71
NEDD8-202ENST00000396828 EDDM13A0A1B0GTR0 161 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 FAM170AA1A519 330 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 USP27XA6NNY8 438 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 KCNU1A8MYU2 1149 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 CAPN9O14815 690 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 PJA2O43164 708 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 IL1BP01584 269 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 CALB1P05937 261 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 SRPRAP08240 638 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms