RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DKK1O94907 266 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 THEGLP0DJG4 465 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 SRCP12931 536 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 GABRB2P47870 512 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 SGCGQ13326 291 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 POLD3Q15054 466 aaPredicted RBP16.75■□□□□ 0.27
DDR1-229ENST00000396342 C5orf22Q49AR2 442 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 HSP90AA4PQ58FG1 418 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 AGBL4Q5VU57 503 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 ERN2Q76MJ5 926 aaKnown RBP16.75■□□□□ 0.27
DDR1-229ENST00000396342 HORMAD1Q86X24 394 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 ZNF354CQ86Y25 554 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 GRIN3AQ8TCU5 1115 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 BAP1Q92560 729 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 FEM1CQ96JP0 617 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 TBCBQ99426 244 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 CALN1Q9BXU9 219 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 CEP44Q9C0F1 390 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 RETREG1Q9H6L5 497 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 EBF2Q9HAK2 575 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 SCUBE2Q9NQ36 999 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 DAAM1Q9Y4D1 1078 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 GPSM3Q9Y4H4 160 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 LAMA1P25391 3075 aa16.75■□□□□ 0.27
DDR1-229ENST00000396342 DRGXA6NNA5 263 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 H3BM21 787 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 PLK4O00444 970 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 CNTN5O94779 1100 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 UCHL3P15374 230 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 HNRNPA2B1P22626 353 aaKnown RBP16.74■□□□□ 0.27
DDR1-229ENST00000396342 RRM1P23921 792 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 SDC4P31431 198 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 CDH5P33151 784 aaPredicted RBP16.74■□□□□ 0.27
DDR1-229ENST00000396342 DUSP3P51452 185 aaPredicted RBP16.74■□□□□ 0.27
DDR1-229ENST00000396342 NEK3P51956 506 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 RWDD4Q6NW29 188 aaKnown RBP16.74■□□□□ 0.27
DDR1-229ENST00000396342 C22orf39Q6P5X5 142 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 C14orf80Q86SX3 495 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 PDZD3Q86UT5 571 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 IRF2BP1Q8IU81 584 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 PCDH20Q8N6Y1 951 aaKnown RBP16.74■□□□□ 0.27
DDR1-229ENST00000396342 ARHGEF26Q96DR7 871 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 ALG14Q96F25 216 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 SIX2Q9NPC8 291 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 MPP6Q9NZW5 540 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 SARDHQ9UL12 918 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 OR51B4Q9Y5P0 310 aa16.74■□□□□ 0.27
DDR1-229ENST00000396342 TAF4O00268 1085 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 SNAP91O60641 907 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 PNMA6AP0CW24 399 aaPredicted RBP16.73■□□□□ 0.27
DDR1-229ENST00000396342 ABCG1P45844 678 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 RPS21P63220 83 aaKnown RBP16.73■□□□□ 0.27
DDR1-229ENST00000396342 RAD51Q06609 339 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 DNAJC3Q13217 504 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
DDR1-229ENST00000396342 COL28A1Q2UY09 1125 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 ALFQ53S48 1182 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 ARSIQ5FYB1 569 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 KIAA1161Q6NSJ0 714 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 TRIM72Q6ZMU5 477 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 ARCQ7LC44 396 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 XYLT1Q86Y38 959 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 OR2A12Q8NGT7 310 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 CPA5Q8WXQ8 436 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 DCBLD2Q96PD2 775 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 MYOCQ99972 504 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 HEPHQ9BQS7 1158 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 HDAC8Q9BY41 377 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 ABCG4Q9H172 646 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 KLHL11Q9NVR0 708 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 NCKIPSDQ9NZQ3 722 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 FHOD1Q9Y613 1164 aa16.73■□□□□ 0.27
DDR1-229ENST00000396342 A6NNZ2 444 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 SDC3O75056 442 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 ENDOD1O94919 500 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 PRLRP16471 622 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 NSFP46459 744 aaKnown RBP16.72■□□□□ 0.27
DDR1-229ENST00000396342 ACADVLP49748 655 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 ATP11AP98196 1134 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 GNA12Q03113 381 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 BNIP3Q12983 259 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 ZNF211Q13398 564 aaPredicted RBP16.72■□□□□ 0.27
DDR1-229ENST00000396342 DPCR1Q3MIW9 517 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 CARD16Q5EG05 197 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 TCP11X2Q5H9J9 407 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 HES3Q5TGS1 186 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 LINGO4Q6UY18 593 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 PTAR1Q7Z6K3 402 aaPredicted RBP16.72■□□□□ 0.27
DDR1-229ENST00000396342 FAM131BQ86XD5 332 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 DRC7Q8IY82 874 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 FAM131CQ96AQ9 280 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 LRIG1Q96JA1 1093 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 CFAP57Q96MR6 1250 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 DUSP23Q9BVJ7 150 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 C1QTNF7Q9BXJ2 289 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 TNKS2Q9H2K2 1166 aa16.72■□□□□ 0.27
DDR1-229ENST00000396342 ARHGAP20Q9P2F6 1191 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms