RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CPXM2Q8N436 756 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 PAQR4Q8N4S7 273 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 TMEM217Q8N7C4 229 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CADM4Q8NFZ8 388 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 NEU4Q8WWR8 484 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 INTS12Q96CB8 462 aaKnown RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 WDFY2Q96P53 400 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CADM1Q9BY67 442 aaKnown RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 NUAK2Q9H093 628 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 SNTG1Q9NSN8 517 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 TFCP2L1Q9NZI6 479 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZNF215Q9UL58 517 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 MKLN1Q9UL63 735 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 ADAM18Q9Y3Q7 739 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CLDN16Q9Y5I7 305 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 RUSC2Q8N2Y8 1516 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 KCNJ18B7U540 433 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 STARD3NLO95772 234 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 DNTTP04053 509 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 RARGP13631 454 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 EDN2P20800 178 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 NFKBIAP25963 317 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CPOXP36551 454 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CPA2P48052 419 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 IFI35P80217 286 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 HOXA4Q00056 320 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CEBPZQ03701 1054 aaKnown RBP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 LSM12Q3MHD2 195 aaKnown RBP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 ANXA2RQ3ZCQ2 193 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CCDC184Q52MB2 194 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 TMEM63BQ5T3F8 832 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CFAP58Q5T655 872 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 VSTM1Q6UX27 236 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 MOB3CQ70IA8 216 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 RRM2BQ7LG56 351 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 SPRED1Q7Z699 444 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 SRBD1Q8N5C6 995 aaKnown RBP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 TMEM116Q8NCL8 245 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZFPM2Q8WW38 1151 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CAVIN3Q969G5 261 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 TM2D2Q9BX73 214 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 FTOQ9C0B1 505 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 CXorf56Q9H5V9 222 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 POLR1BQ9H9Y6 1135 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 INTS6Q9UL03 887 aaKnown RBP5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 SNX8Q9Y5X2 465 aa5.36□□□□□ -1.55
HMGB1P10-201ENST00000395823 EMSYQ7Z589 1322 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 FAM237BA0A1B0GVD1 139 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 TARSL2A2RTX5 802 aaKnown RBP5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 OR6C68A6NDL8 312 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 BTBD19C9JJ37 291 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 LIASO43766 372 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 NARSO43776 548 aaKnown RBP5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 FOXD2O60548 495 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 GCATO75600 419 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 DDAH2O95865 285 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 HNRNPCP07910 306 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 FCGR2AP12318 317 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 INSRRP14616 1297 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 FMO4P31512 558 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 PSMB10P40306 273 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 AVPR1BP47901 424 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 CYP4A11Q02928 519 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 TSTD2Q5T7W7 516 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 ARMC3Q5W041 872 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 TBC1D9BQ66K14 1250 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 SLC46A3Q7Z3Q1 461 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 KLBQ86Z14 1044 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 GHDCQ8N2G8 530 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 SCFD2Q8WU76 684 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 CCDC17Q96LX7 622 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 IL17RBQ9NRM6 502 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 KIAA1456Q9P272 454 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 NFKBIL1Q9UBC1 381 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZNF70Q9UC06 446 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 SERGEFQ9UGK8 458 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 RAPGEFL1Q9UHV5 662 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 CDH22Q9UJ99 828 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 ICKQ9UPZ9 632 aa5.35□□□□□ -1.55
HMGB1P10-201ENST00000395823 ADGRF5Q8IZF2 1346 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 FRMD3A2A2Y4 597 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 CXorf65A6NEN9 183 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 SNAP23O00161 211 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 STRNO43815 780 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 PAGE4O60829 102 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 OR2C1O95371 312 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 CBX6O95503 412 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 SERPINC1P01008 464 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 EIF2S1P05198 315 aaKnown RBP5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 AKR1A1P14550 325 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 IL11P20809 199 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 TTKP33981 857 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 UBA7P41226 1012 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 RARRES1P49788 294 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 CTSWP56202 376 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 PSMC6P62333 389 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms