RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SPDL1Q96EA4 605 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 NAT9Q9BTE0 207 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 FSD1LQ9BXM9 530 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 PPP1R12CQ9BZL4 782 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 NOD2Q9HC29 1040 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 SLC2A6Q9UGQ3 507 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 IPO11Q9UI26 975 aaKnown RBP18.22■□□□□ 0.51
SREBF1-204ENST00000395756 EMCNQ9ULC0 261 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 NEU3Q9UQ49 428 aa18.22■□□□□ 0.51
SREBF1-204ENST00000395756 ARHGEF37A1IGU5 675 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 MOXD2PA6NHM9 499 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 VAPBO95292 243 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 HLA-DQB2P05538 268 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 SPANXN3Q5MJ09 141 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 TEDDM1Q5T9Z0 273 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 RNF19BQ6ZMZ0 732 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 CCNJLQ8IV13 435 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 HAPLN3Q96S86 360 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 TXLNGQ9NUQ3 528 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 SCAMP3O14828 347 aaKnown RBP18.21■□□□□ 0.51
SREBF1-204ENST00000395756 MTSS1O43312 755 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 GLRBP48167 497 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 CDH17Q12864 832 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 RTP2Q5QGT7 225 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 ATG16L1Q676U5 607 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 ARL8BQ9NVJ2 186 aa18.21■□□□□ 0.51
SREBF1-204ENST00000395756 SLC12A8A0AV02 714 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 TBKBP1A7MCY6 615 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ARVCFO00192 962 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 PHGDHO43175 533 aaKnown RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 CCNFP41002 786 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 SLC11A1P49279 550 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ERFP50548 548 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 COG7P83436 770 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 RCN2Q14257 317 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 NFE2Q16621 373 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 BRMS1LQ5PSV4 323 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ESRP1Q6NXG1 681 aaKnown RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 TMEM135Q86UB9 458 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 DENND6AQ8IWF6 608 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 CFAP52Q8N1V2 620 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 NT5MQ9NPB1 228 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ARHGEF3Q9NR81 526 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 PPARGC1AQ9UBK2 798 aaKnown RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 KCNU1A8MYU2 1149 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 MGRN1O60291 552 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 GJB3O75712 270 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 HAPLN1P10915 354 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 YWHAQP27348 245 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 MLLT6P55198 1093 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ZNF460Q14592 562 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 NAPEPLDQ6IQ20 393 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 FAM117BQ6P1L5 589 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 CRLF3Q8IUI8 442 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 EBF4Q9BQW3 602 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 NMUR2Q9GZQ4 415 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 CCSER2Q9H7U1 834 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 CCL22O00626 93 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 SELPP16109 830 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ALDH18A1P54886 795 aaKnown RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 MPP3Q13368 585 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 GPNMBQ14956 572 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 RBBP5Q15291 538 aaKnown RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 ASRGL1Q7L266 308 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 UTP4Q969X6 686 aaKnown RBP18.2■□□□□ 0.5
SREBF1-204ENST00000395756 FAM210AQ96ND0 272 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 GLOD4Q9HC38 313 aa18.2■□□□□ 0.5
SREBF1-204ENST00000395756 HAUS5O94927 633 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 EIF4EBP2Q13542 120 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-204ENST00000395756 ITGA9Q13797 1035 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 CNGA3Q16281 694 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 TMCO2Q7Z6W1 182 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-204ENST00000395756 LONP2Q86WA8 852 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 HMCESQ96FZ2 354 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 CPNE1Q99829 537 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 TBL1YQ9BQ87 522 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 TMEM161AQ9NX61 479 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 SIRPGQ9P1W8 387 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 A0A096LPK6 155 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 CCNCP24863 283 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 SPRP35270 261 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-204ENST00000395756 FAM189BP81408 668 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 IGSF8Q969P0 613 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 PPP1R36Q96LQ0 422 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 RPRD1AQ96P16 312 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-204ENST00000395756 VAT1Q99536 393 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 TRIM62Q9BVG3 475 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 TBC1D10AQ9BXI6 508 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 IL22Q9GZX6 179 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 BRD8Q9H0E9 1235 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 RAD54BQ9Y620 910 aa18.19■□□□□ 0.5
SREBF1-204ENST00000395756 TDRD15B5MCY1 1934 aaKnown RBP18.18■□□□□ 0.5
SREBF1-204ENST00000395756 MATN3O15232 486 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 PLIN3O60664 434 aa18.18■□□□□ 0.5
SREBF1-204ENST00000395756 USP1O94782 785 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms