RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ITGA7Q13683 1181 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 FBXO47Q5MNV8 452 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 SLC27A1Q6PCB7 646 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 MCMBPQ9BTE3 642 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 ILKAPQ9H0C8 392 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 ZCWPW1Q9H0M4 648 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 SNX25Q9H3E2 840 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 OXSMQ9NWU1 459 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 FAM72CH0Y354 149 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 MATN2O00339 956 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 PIRO00625 290 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 AP1G1O43747 822 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 H2AFYO75367 372 aaKnown RBP18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 THRAP10827 490 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 NOS2P35228 1153 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 TMEM62Q0P6H9 643 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 NME3Q13232 169 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 CERCAMQ5T4B2 595 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 FAM72AQ5TYM5 149 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 SYPL2Q5VXT5 272 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 FAM72DQ6L9T8 149 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 ALKAL1Q6UXT8 129 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 TMC7Q7Z402 723 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 ZNF410Q86VK4 478 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 FAM72BQ86X60 149 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 DNAAF3Q8N9W5 541 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 NAT14Q8WUY8 206 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 SREK1Q8WXA9 508 aaKnown RBP18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 DCUN1D1Q96GG9 259 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 CNDP1Q96KN2 507 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 PPP1R36Q96LQ0 422 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 SETD4Q9NVD3 440 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 C6orf203Q9P0P8 240 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 GINS2Q9Y248 185 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 C15orf38-AP3S2A0A0A6YYH1 394 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 SMIM18P0DKX4 95 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 MPP3Q13368 585 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 TLR1Q15399 786 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 GRIK4Q16099 956 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 DGKDQ16760 1214 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 LSM12Q3MHD2 195 aaKnown RBP18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 KCTD11Q693B1 232 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 ARPINQ7Z6K5 226 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 SATL1Q86VE3 508 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 KCNMB4Q86W47 210 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 DSELQ8IZU8 1212 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 MLPHQ9BV36 600 aaPredicted RBP18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 NXF3Q9H4D5 531 aaKnown RBP18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 G3BP2Q9UN86 482 aaKnown RBP18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 COMMD3-BMI1R4GMX3 469 aa18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 MKI67P46013 3256 aaKnown RBP18.67■□□□□ 0.58
PCDHA1-202ENST00000394633 RGSL1A5PLK6 1076 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 ZBTB24O43167 697 aaPredicted RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 TIMM44O43615 452 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 ATP9BO43861 1147 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 BEST1O76090 585 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 RECQL4O94761 1208 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 ERCC2P18074 760 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 CD68P34810 354 aaPredicted RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 VEGFBP49765 207 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 NDUFV1P49821 464 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 THOP1P52888 689 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 CSE1LP55060 971 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 BEX3Q00994 111 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 PIP4K2CQ8TBX8 421 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 VPS39Q96JC1 886 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 DRC3Q9H069 523 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 VCX3AQ9NNX9 186 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 IARS2Q9NSE4 1012 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 RAP2CQ9Y3L5 183 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 KLHL33A6NCF5 533 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 TK2O00142 265 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 CLDN5O00501 218 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 HDAC3O15379 428 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 AMHP03971 560 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 SBK3P0C264 359 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 XRCC1P18887 633 aaPredicted RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 AKAP5P24588 427 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 EPHA3P29320 983 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 CSRP3P50461 194 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 LSAMPQ13449 338 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 ZNF423Q2M1K9 1284 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 C16orf89Q6UX73 402 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 HFE2Q6ZVN8 426 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 TMEM151AQ8N4L1 468 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 MARVELD2Q8N4S9 558 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 KYQ8NBH2 561 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 APOL2Q9BQE5 337 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 ACE2Q9BYF1 805 aaPredicted RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 ANLNQ9NQW6 1124 aa18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 C20orf96Q9NUD7 363 aaPredicted RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 UBQLN1Q9UMX0 589 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-202ENST00000394633 GRID2O43424 1007 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 DENRO43583 198 aaKnown RBP18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 RPL14P50914 215 aaKnown RBP18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 PGGT1BP53609 377 aa18.65■□□□□ 0.58
PCDHA1-202ENST00000394633 SP3Q02447 781 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms