RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TRIB2Q92519 343 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 EDEM1Q92611 657 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 CEP19Q96LK0 163 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 R3HDMLQ9H3Y0 253 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 OCEL1Q9H607 264 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PCDH12Q9NPG4 1184 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 MRPL40Q9NQ50 206 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 TLK1Q9UKI8 766 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 COG5Q9UP83 839 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FIS1Q9Y3D6 152 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 COL4A5P29400 1685 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ARL5CA6NH57 179 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 C3orf70A6NLC5 250 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 MTA2O94776 668 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PARNO95453 639 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 TRUB2O95900 331 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 EOMESO95936 686 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 LTFP02788 710 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 GSTT2P0CG29 244 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 GSTT2BP0CG30 244 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 NELFEP18615 380 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 CYP2F1P24903 491 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PEX2P28328 305 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ASPAP45381 313 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 CD97P48960 835 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 HARS2P49590 506 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 TUBA1BP68363 451 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 MRPS22P82650 360 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 IL1RL1Q01638 556 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 BTG3Q14201 252 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 NEDD8Q15843 81 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 C15orf59Q2T9L4 293 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 LRRC8EQ6NSJ5 796 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 RAPH1Q70E73 1250 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TUBA1AQ71U36 451 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ASRGL1Q7L266 308 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 RBM15BQ8NDT2 890 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 TFAP2BQ92481 460 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PBXIP1Q96AQ6 731 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 IFT43Q96FT9 208 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TMEM121Q9BTD3 319 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.79□□□□□ -1.48
RFFL-202ENST00000394597 CDHR5Q9HBB8 845 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 S100A14Q9HCY8 104 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 CREBZFQ9NS37 354 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 RNF186Q9NXI6 227 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 LSM7Q9UK45 103 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 PCDHB12Q9Y5F1 795 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FAM237BA0A1B0GVD1 139 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 H0Y626 953 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 FSCN2O14926 492 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TM9SF1O15321 606 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DDX3YO15523 660 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 ERBB2P04626 1255 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 FOXN2P32314 431 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 BRCC3P46736 316 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MARCKSL1P49006 195 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ACADVLP49748 655 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 SESN2P58004 480 aaPredicted RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 WASHC5Q12768 1159 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 RALGDSQ12967 914 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ATP13A4Q4VNC1 1196 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 C1orf220Q5T0J3 134 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TTC27Q6P3X3 843 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 POLNQ7Z5Q5 900 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TREML1Q86YW5 311 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 RASGEF1CQ8N431 466 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ALG3Q92685 438 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 WNT8BQ93098 351 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 PPP1R36Q96LQ0 422 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 AGAP3Q96P47 875 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 DEPDC7Q96QD5 511 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CPXM1Q96SM3 734 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TSEN34Q9BSV6 310 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 C1orf50Q9BV19 199 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TMEM109Q9BVC6 243 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ARHGAP39Q9C0H5 1083 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 HIPK3Q9H422 1215 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 MARCH7Q9H992 704 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 HMG20AQ9NP66 347 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 SMYD2Q9NRG4 433 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 SYBUQ9NX95 663 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 GNEQ9Y223 722 aaKnown RBP5.78□□□□□ -1.48
RFFL-202ENST00000394597 ANGPTL3Q9Y5C1 460 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CARNS1A5YM72 827 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ARVCFO00192 962 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 NEMP1O14524 444 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 IDH3BO43837 385 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TM7SF2O76062 418 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 YWHAQP27348 245 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CCR1P32246 355 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ENTPD1P49961 510 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CLCNKBP51801 687 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 TAS2R40P59535 323 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 EFEMP1Q12805 493 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 SYCP2LQ5T4T6 812 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 GPR107Q5VW38 600 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 LLGL2Q6P1M3 1020 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 ZBTB49Q6ZSB9 765 aa5.78□□□□□ -1.48
RFFL-202ENST00000394597 CHSY1Q86X52 802 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms