RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PLA2G16P53816 162 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 BFSP1Q12934 665 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 ART3Q13508 389 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 TMEM198Q66K66 360 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 ADGRG5Q8IZF4 528 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 CPA5Q8WXQ8 436 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 DACH2Q96NX9 599 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 TM9SF2Q99805 663 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 PRRG3Q9BZD7 231 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 IFT80Q9P2H3 777 aaPredicted RBP12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 PTBP2Q9UKA9 531 aaKnown RBP12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 PRPF19Q9UMS4 504 aaKnown RBP12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 SHOC2Q9UQ13 582 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 LAMB2P55268 1798 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
SLC28A1-203ENST00000394573 TYW5A2RUC4 315 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 LINC01387J3KSC0 135 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 MED24O75448 989 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 VAPBO95292 243 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 PKLRP30613 574 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 GCLMP48507 274 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 RHAGQ02094 409 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 MERTKQ12866 999 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 CLVS2Q5SYC1 327 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 SCML4Q8N228 414 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 DLG3Q92796 817 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 HAS1Q92839 578 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 BIRC7Q96CA5 298 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 ZNF512BQ96KM6 892 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 ACO2Q99798 780 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 COG4Q9H9E3 785 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 CYP26B1Q9NR63 512 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 CHST12Q9NRB3 414 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 XPO7Q9UIA9 1087 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 NOCTQ9UK39 431 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 VPS4AQ9UN37 437 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 HCN4Q9Y3Q4 1203 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 PGRP06401 933 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 MYF6P23409 242 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 GTF2E2P29084 291 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 GRSF1Q12849 480 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 PDPRQ8NCN5 879 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 FAM83FQ8NEG4 500 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 NDNFQ8TB73 568 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 SDCCAG3Q96C92 435 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 NECTIN4Q96NY8 510 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 PIGSQ96S52 555 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 TBC1D22BQ9NU19 505 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 PKD2L1Q9P0L9 805 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 AURKCQ9UQB9 309 aa12.73□□□□□ -0.37
SLC28A1-203ENST00000394573 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SLC26A3P40879 764 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 ACAP2Q15057 778 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 TTC39BQ5VTQ0 682 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 BROXQ5VW32 411 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 MFSD7Q6UXD7 560 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 LILRB2Q8N423 598 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 CPA6Q8N4T0 437 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 OR6F1Q8NGZ6 308 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SPATA18Q8TC71 538 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 DHX38Q92620 1227 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 GIMAP5Q96F15 307 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 APBA2Q99767 749 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 EFHD1Q9BUP0 239 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 C1QTNF7Q9BXJ2 289 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 BEX2Q9BXY8 128 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 CPNE7Q9UBL6 633 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 PDZK1P1A8MUH7 402 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 FAM155AB1AL88 458 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 GSNP06396 782 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SNRPAP09012 282 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 FGF3P11487 239 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 HCAR3P49019 387 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 NME5P56597 212 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 ZMYND11Q15326 602 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 MBLAC2Q68D91 279 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 TRIM63Q969Q1 353 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SORT1Q99523 831 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 C17orf62Q9BQA9 187 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms