RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ZACNQ401N2 412 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 SLC45A4Q5BKX6 768 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 CENPLQ8N0S6 344 aaPredicted RBP9.26□□□□□ -0.93
CDH11-202ENST00000394156 ZNF558Q96NG5 402 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 PPP1R10Q96QC0 940 aaKnown RBP9.26□□□□□ -0.93
CDH11-202ENST00000394156 BBS2Q9BXC9 721 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 ASB8Q9H765 288 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 MRPS23Q9Y3D9 190 aaKnown RBP9.26□□□□□ -0.93
CDH11-202ENST00000394156 AK5Q9Y6K8 562 aa9.26□□□□□ -0.93
CDH11-202ENST00000394156 C1orf232A0A0U1RR37 186 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 KPNA6O60684 536 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ZNF23P17027 643 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 MAT2AP31153 395 aaKnown RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 CD151P48509 253 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ZNF786Q8N393 782 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 CMTM5Q96DZ9 223 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 SNX5Q9Y5X3 404 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 SEC22BO75396 215 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 NQO1P15559 274 aaKnown RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 CASP9P55211 416 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 MRPS5P82675 430 aaKnown RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 CNGA2Q16280 664 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 FBXL19Q6PCT2 694 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 HNRNPLLQ8WVV9 542 aaKnown RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 SERPINB11Q96P15 392 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 STOML1Q9UBI4 398 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ZNF214Q9UL59 606 aaPredicted RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 ACOT9Q9Y305 439 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 hCG_1818297A0A087WSY0 165 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PRIM2P49643 509 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 SGCGQ13326 291 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 RAET1GQ6H3X3 334 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ANKRD52Q8NB46 1076 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 HDAC10Q969S8 669 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 VPS33BQ9H267 617 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 CFAP97Q9P2B7 532 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 IGKV6D-41A0A0C4DH26 115 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PEX11AO75192 247 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 F9P00740 461 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 NTRK1P04629 796 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PCCBP05166 539 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PAEPP09466 180 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PGAM1P18669 254 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PGGT1BP53609 377 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 CCDC142Q17RM4 750 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 DUSP28Q4G0W2 176 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 CYB5D1Q6P9G0 228 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ANKS3Q6ZW76 656 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 KATNAL2Q8IYT4 538 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ESAMQ96AP7 390 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ROGDIQ9GZN7 287 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 PCDH12Q9NPG4 1184 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 NCKIPSDQ9NZQ3 722 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 DLGAP2Q9P1A6 1054 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 UXTQ9UBK9 157 aaPredicted RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 MAFBQ9Y5Q3 323 aaPredicted RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 ATXN7L2Q5T6C5 722 aaPredicted RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 ARMC12Q5T9G4 340 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 VWA5B1Q5TIE3 1220 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 MPP5Q8N3R9 675 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 CSGALNACT1Q8TDX6 532 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 MCRS1Q96EZ8 462 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 UBE2OQ9C0C9 1292 aaKnown RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 RSPH9Q9H1X1 276 aaPredicted RBP9.25□□□□□ -0.93
CDH11-202ENST00000394156 APPL1Q9UKG1 709 aa9.25□□□□□ -0.93
CDH11-202ENST00000394156 LOC102724159A0A0B4J2E5 919 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 ALOX15P16050 662 aaPredicted RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 NELFEP18615 380 aaKnown RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 TYMPP19971 482 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 ARL2P36404 184 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 SERPINH1P50454 418 aaKnown RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 CDH13P55290 713 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 SMAD3P84022 425 aaKnown RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 MPP1Q00013 466 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 MGAT5Q09328 741 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 PWP2Q15269 919 aaKnown RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 SLC10A6Q3KNW5 377 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 HECTD3Q5T447 861 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 GPR158Q5T848 1215 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 HGSNATQ68CP4 663 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 SCUBE1Q8IWY4 988 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 UNC5BQ8IZJ1 945 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 FIBCD1Q8N539 461 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 ARL14EPQ8N8R7 260 aaPredicted RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 OR10G6Q8NH81 332 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 PNPT1Q8TCS8 783 aaKnown RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDH11-202ENST00000394156 DUSP16Q9BY84 665 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 SF3B1O75533 1304 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDH11-202ENST00000394156 TRAV19A0A0A6YYK7 116 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 NPEPPSL1A6NEC2 478 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 CORO1AP31146 461 aaKnown RBP9.24□□□□□ -0.93
CDH11-202ENST00000394156 SLC25A3Q00325 362 aa9.24□□□□□ -0.93
CDH11-202ENST00000394156 CDH17Q12864 832 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms