RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 PHF7Q9BWX1 381 aaPredicted RBP24.77■■□□□ 1.56
LRFN4-202ENST00000393952 KLHL8Q9P2G9 620 aaPredicted RBP24.77■■□□□ 1.56
LRFN4-202ENST00000393952 INTS6Q9UL03 887 aaKnown RBP24.77■■□□□ 1.56
LRFN4-202ENST00000393952 HPCAL4Q9UM19 191 aa24.77■■□□□ 1.56
LRFN4-202ENST00000393952 ACTL7AQ9Y615 435 aa24.77■■□□□ 1.56
LRFN4-202ENST00000393952 TRIM24O15164 1050 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 OPHN1O60890 802 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 ZMPSTE24O75844 475 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 RUNX3Q13761 415 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 SMAD2Q15796 467 aaKnown RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 TEX44Q53QW1 395 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 ARHGEF18Q6ZSZ5 1173 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 C12orf40Q86WS4 652 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 CPA6Q8N4T0 437 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 TTC8Q8TAM2 541 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 SNF8Q96H20 258 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 AGAP3Q96P47 875 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 SLC2A11Q9BYW1 496 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 GRHL1Q9NZI5 618 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 CARSP49589 748 aaKnown RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 PLK1P53350 603 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 DRG2P55039 364 aaKnown RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 SLC10A7Q0GE19 358 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 SLC12A1Q13621 1099 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 HNRNPDQ14103 355 aaKnown RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 PLEKHG6Q3KR16 790 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 PID1Q7Z2X4 250 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 CNTD1Q8N815 330 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 ZNF557Q8N988 423 aaPredicted RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 DCAF4L2Q8NA75 395 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 RUBCNQ92622 972 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 LRRC45Q96CN5 670 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 XPO6Q96QU8 1125 aaKnown RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 VAT1Q99536 393 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 FAM114A2Q9NRY5 505 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 DNAJC17Q9NVM6 304 aaKnown RBP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 RBM22Q9NW64 420 aaKnown RBP eCLIP24.76■■□□□ 1.55
LRFN4-202ENST00000393952 GTSE1Q9NYZ3 720 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 VPS51Q9UID3 782 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 GGA2Q9UJY4 613 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 FBXO10Q9UK96 956 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 TRHDEQ9UKU6 1024 aa24.76■■□□□ 1.55
LRFN4-202ENST00000393952 PRUNE2Q8WUY3 3088 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 F5H423 210 aaPredicted RBP24.75■■□□□ 1.55
LRFN4-202ENST00000393952 ZBTB24O43167 697 aaPredicted RBP24.75■■□□□ 1.55
LRFN4-202ENST00000393952 METTL18O95568 372 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 PABPC1P11940 636 aaKnown RBP24.75■■□□□ 1.55
LRFN4-202ENST00000393952 ARF5P84085 180 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 FUT11Q495W5 492 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 PITRM1Q5JRX3 1037 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 FAXCQ5TGI0 409 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 TMCO4Q5TGY1 634 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 IZUMO3Q5VZ72 239 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 PTCRAQ6ISU1 281 aaPredicted RBP24.75■■□□□ 1.55
LRFN4-202ENST00000393952 WDR93Q6P2C0 686 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 ETFBKMTQ8IXQ9 262 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 NSMCE1Q8WV22 266 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 TEKT5Q96M29 485 aa24.75■■□□□ 1.55
LRFN4-202ENST00000393952 UBA2Q9UBT2 640 aaPredicted RBP24.75■■□□□ 1.55
LRFN4-202ENST00000393952 MIA3Q5JRA6 1907 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.74■■□□□ 1.55
LRFN4-202ENST00000393952 DNALI1O14645 258 aaPredicted RBP24.74■■□□□ 1.55
LRFN4-202ENST00000393952 SEC31AO94979 1220 aaKnown RBP24.74■■□□□ 1.55
LRFN4-202ENST00000393952 RENBPP51606 427 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 NR1H3Q13133 447 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 AAK1Q2M2I8 961 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 MARC1Q5VT66 337 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 LINGO4Q6UY18 593 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 C4orf22Q6V702 233 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 TEX26Q8N6G2 289 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 ZNF599Q96NL3 588 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 C2orf49Q9BVC5 232 aaPredicted RBP24.74■■□□□ 1.55
LRFN4-202ENST00000393952 RAB6BQ9NRW1 208 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 WHRNQ9P202 907 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 LIMD1Q9UGP4 676 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 RAB21Q9UL25 225 aa24.74■■□□□ 1.55
LRFN4-202ENST00000393952 ARNTLO00327 626 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 TULP3O75386 442 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 HLA-DQB2P05538 268 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 CISD3P0C7P0 127 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 CD68P34810 354 aaPredicted RBP24.73■■□□□ 1.55
LRFN4-202ENST00000393952 SLC6A11P48066 632 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 DGKGP49619 791 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 BASP1P80723 227 aaKnown RBP24.73■■□□□ 1.55
LRFN4-202ENST00000393952 TFF2Q03403 129 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 LBRQ14739 615 aaKnown RBP24.73■■□□□ 1.55
LRFN4-202ENST00000393952 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.73■■□□□ 1.55
LRFN4-202ENST00000393952 BRD9Q9H8M2 597 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 ETNK1Q9HBU6 452 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 PRDM6Q9NQX0 595 aa24.73■■□□□ 1.55
LRFN4-202ENST00000393952 NEBLO76041 1014 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 CD160O95971 181 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 MYBL2P10244 700 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 NFKB1P19838 968 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 PSMB4P28070 264 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 TNFRSF8P28908 595 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 MMP13P45452 471 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 ITGA8P53708 1063 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 CALCOCO2Q13137 446 aa24.72■■□□□ 1.55
LRFN4-202ENST00000393952 CUL1Q13616 776 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms