RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MAP3K7CLP57077 242 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 GALNT2Q10471 571 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 LSM12Q3MHD2 195 aaKnown RBP19.18■□□□□ 0.66
CBX1-202ENST00000393408 MMEL1Q495T6 779 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 INTS6LQ5JSJ4 861 aaKnown RBP19.18■□□□□ 0.66
CBX1-202ENST00000393408 PPM1LQ5SGD2 360 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 LIPMQ5VYY2 423 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 ITPRIPL1Q6GPH6 555 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
CBX1-202ENST00000393408 SDCCAG8Q86SQ7 713 aaPredicted RBP19.18■□□□□ 0.66
CBX1-202ENST00000393408 NCSTNQ92542 709 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 CDCA5Q96FF9 252 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 BTBD9Q96Q07 612 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 TSPAN18Q96SJ8 248 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 ULBP1Q9BZM6 244 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 PSMD13Q9UNM6 376 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 NUP205Q92621 2012 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 YJEFN3A6XGL0 299 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 TPH1P17752 444 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 CCR10P46092 362 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 GRIA4P48058 902 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 RAB27AP51159 221 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 HK2P52789 917 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 UBXN11Q5T124 520 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 KIAA0319Q5VV43 1072 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 SEL1L3Q68CR1 1132 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 MED10Q9BTT4 135 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 TASP1Q9H6P5 420 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 ACSS2Q9NR19 701 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 PACSIN3Q9UKS6 424 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 C9IYK1 514 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 GOLGA8TH3BQL2 631 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 NEMP1O14524 444 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 GRID2O43424 1007 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 FBXO21O94952 628 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 GJA5P36382 358 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 RABGGTBP53611 331 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 GJA9P57773 515 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 DAOAP59103 153 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 PDK3Q15120 406 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 GRAMD1BQ3KR37 738 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 RASIP1Q5U651 963 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 AP1ARQ63HQ0 302 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 C16orf89Q6UX73 402 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 PQLC1Q8N2U9 271 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 CPSF7Q8N684 471 aaKnown RBP19.17■□□□□ 0.66
CBX1-202ENST00000393408 KYQ8NBH2 561 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 TMEM40Q8WWA1 233 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 ZNF385DQ9H6B1 395 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 C6orf203Q9P0P8 240 aaPredicted RBP19.17■□□□□ 0.66
CBX1-202ENST00000393408 INPP5FQ9Y2H2 1132 aa19.17■□□□□ 0.66
CBX1-202ENST00000393408 SMIM35A0A1B0GVV1 85 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 CABYRO75952 493 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 PIGNO95427 931 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 EPHA3P29320 983 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 ALDH1A3P47895 512 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 PRKAA2P54646 552 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 ARL13AQ5H913 290 aaPredicted RBP19.16■□□□□ 0.66
CBX1-202ENST00000393408 WSCD1Q658N2 575 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 FBXL19Q6PCT2 694 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 ZC3HC1Q86WB0 502 aaKnown RBP19.16■□□□□ 0.66
CBX1-202ENST00000393408 DSELQ8IZU8 1212 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 ICA1LQ8NDH6 482 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 NLGN2Q8NFZ4 835 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 RP9Q8TA86 221 aaKnown RBP19.16■□□□□ 0.66
CBX1-202ENST00000393408 SERPINI1Q99574 410 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 TLK1Q9UKI8 766 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 SLC22A2O15244 555 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 FAM200BP0CF97 657 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 SMIM10L2AP0DMW4 78 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 SMIM10L2BP0DMW5 78 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 GRIA2P42262 883 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 UGT2A3Q6UWM9 527 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 ARRDC4Q8NCT1 418 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 STON2Q8WXE9 905 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 DPF3Q92784 378 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 PPP1R36Q96LQ0 422 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 TEKT5Q96M29 485 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 VAT1Q99536 393 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 RHOJQ9H4E5 214 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 VPS28Q9UK41 221 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 DTNAQ9Y4J8 743 aa19.16■□□□□ 0.66
CBX1-202ENST00000393408 GABRDO14764 452 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 PHGDHO43175 533 aaKnown RBP19.15■□□□□ 0.66
CBX1-202ENST00000393408 TFEBP19484 476 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 FOLH1Q04609 750 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 PRKAA1Q13131 559 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 ZSCAN18Q8TBC5 510 aaPredicted RBP19.15■□□□□ 0.66
CBX1-202ENST00000393408 STYXQ8WUJ0 223 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 PGAP3Q96FM1 320 aaPredicted RBP19.15■□□□□ 0.66
CBX1-202ENST00000393408 APBA2Q99767 749 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 NSMCE4AQ9NXX6 385 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 UBP1Q9NZI7 540 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 ZDHHC2Q9UIJ5 367 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 FNDC1Q4ZHG4 1894 aaPredicted RBP19.15■□□□□ 0.66
CBX1-202ENST00000393408 MBLAC1A4D2B0 266 aaPredicted RBP19.15■□□□□ 0.66
CBX1-202ENST00000393408 CAPN8A6NHC0 703 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 AP1G1O43747 822 aa19.15■□□□□ 0.66
CBX1-202ENST00000393408 PABPC4LP0CB38 370 aaKnown RBP19.15■□□□□ 0.66
CBX1-202ENST00000393408 PPARGP37231 505 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms