RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 CCDC189A1A4V9 331 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 OR6C68A6NDL8 312 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 RRN3P2A6NIE6 340 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 NCAM2O15394 837 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 HOXC11O43248 304 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 STRNO43815 780 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ZC3H11AO75152 810 aaKnown RBP eCLIP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TULP3O75386 442 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TOP3BO95985 862 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 POLBP06746 335 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 IFIT1P09914 478 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 CYP19A1P11511 503 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PRF1P14222 555 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 XBP1P17861 261 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PRKCHP24723 683 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 CNTFP26441 200 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TYK2P29597 1187 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PTGER1P34995 402 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 HNF1BP35680 557 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PSMC2P35998 433 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 GJC1P36383 396 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PGM1P36871 562 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 NR4A2P43354 598 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 MTNR1AP48039 350 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ALDH7A1P49419 539 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 CCR5P51681 352 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 FOXG1P55316 489 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SRSF1Q07955 248 aaKnown RBP eCLIP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TRPC3Q13507 836 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 KLF9Q13886 244 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ETFDHQ16134 617 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SMTNL2Q2TAL5 461 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 AP5B1Q2VPB7 878 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ALG10Q5BKT4 473 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ARL13AQ5H913 290 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ALG10BQ5I7T1 473 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SH2D4BQ5SQS7 431 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 MANEAQ5SRI9 462 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 C6orf10Q5SRN2 563 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 NAA35Q5VZE5 725 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ATG16L1Q676U5 607 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TTLL5Q6EMB2 1281 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 GJB7Q6PEY0 223 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SHC4Q6S5L8 630 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ZNF793Q6ZN11 406 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 LRRC8DQ7L1W4 858 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 RNF144BQ7Z419 303 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PIM3Q86V86 326 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 CCDC25Q86WR0 208 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 DPP10Q8N608 796 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ARFGAP1Q8N6T3 406 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SCAIQ8N9R8 606 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 NOC3LQ8WTT2 800 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 HDAC7Q8WUI4 952 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 FAR1Q8WVX9 515 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 MSI2Q96DH6 328 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 RNFT2Q96EX2 444 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 WBP1Q96G27 269 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TEFMQ96QE5 360 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 FRG2BQ96QU4 278 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 IFT27Q9BW83 186 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 FRMD8Q9BZ67 464 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SPRTNQ9H040 489 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 HIPK3Q9H422 1215 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 STN1Q9H668 368 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TASP1Q9H6P5 420 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 AAMDCQ9H7C9 122 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ACAD9Q9H845 621 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TTC12Q9H892 705 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 Q9N2J8 555 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SPAG4Q9NPE6 437 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 FZD3Q9NPG1 666 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SEMA4BQ9NPR2 832 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TLR8Q9NR97 1041 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 RNF146Q9NTX7 359 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 POT1Q9NUX5 634 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TMEM160Q9NX00 188 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ZDHHC7Q9NXF8 308 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SAGE1Q9NXZ1 904 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ELOVL5Q9NYP7 299 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 GGA3Q9NZ52 723 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 PDP2Q9P2J9 529 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 CNOT7Q9UIV1 285 aaKnown RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 CDH22Q9UJ99 828 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 GJD2Q9UKL4 321 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 ICKQ9UPZ9 632 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 OSGIN2Q9Y236 505 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 AFG3L2Q9Y4W6 797 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 SLC4A4Q9Y6R1 1079 aa1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TTBK1Q5TCY1 1321 aaPredicted RBP1.82□□□□□ -2.12
RNU6-440P-201ENST00000390882 TRBV5-7A0A0A0MS05 114 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 GOLGA6L10A0A0M3HER8 536 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 A0A1W2PPC1 479 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 TARSL2A2RTX5 802 aaKnown RBP1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 GAGE12JA6NER3 117 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 FAM90A7PA6NKC0 464 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 FAM90A22PA8MWA6 464 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 FAM90A12PA8MX19 464 aa1.81□□□□□ -2.12
RNU6-440P-201ENST00000390882 FAM90A23PA8MXZ1 464 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms