RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 GRIA3P42263 894 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 NPTX2P47972 431 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 MOB2Q70IA6 237 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 VASH1Q7L8A9 365 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 UNC5BQ8IZJ1 945 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 ANKFN1Q8N957 763 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 TDRD5Q8NAT2 981 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 TMA16Q96EY4 203 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 C20orf96Q9NUD7 363 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 SLC17A6Q9P2U8 582 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 H7C0C1 242 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 LSM8O95777 96 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 GMPRP36959 345 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ATP5OP48047 213 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 TRPC1P48995 793 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 DMPKQ09013 629 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 PTK2BQ14289 1009 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 AGAP7PQ5VUJ5 663 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ZNF280DQ6N043 979 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 WDTC1Q8N5D0 677 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 MFSD2AQ8NA29 543 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 MCUQ8NE86 351 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 AGR3Q8TD06 166 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 DCPSQ96C86 337 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 DUS3LQ96G46 650 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 CNDP2Q96KP4 475 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 SDCBP2Q9H190 292 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 VRTNQ9H8Y1 702 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ADA2Q9NZK5 511 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 SUCOQ9UBS9 1254 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 PCSK1NQ9UHG2 260 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 TCAF2A6NFQ2 919 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 NEMP1O14524 444 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 BCL10O95999 233 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 MX2P20592 715 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 TCF7P36402 384 aaPredicted RBP14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ZNF132P52740 706 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 NME5P56597 212 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 WNT7BP56706 349 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 BACE1P56817 501 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ZNF618Q5T7W0 954 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 KCTD8Q6ZWB6 473 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 TMEM35BQ8NCS4 154 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 JOSD2Q8TAC2 188 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 NPAS2Q99743 824 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 HERC2P3Q9BVR0 1158 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 CALN1Q9BXU9 219 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 PARVBQ9HBI1 364 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 ZNF358Q9NW07 568 aa14.9□□□□□ -0.02
VPS9D1-201ENST00000389386 TCRBV3S1A0A5B6 114 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 KCNN4O15554 427 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 STAM2O75886 525 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 SEC24DO94855 1032 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PTPRAP18433 802 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 TNNI1P19237 187 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 MAP4P27816 1152 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 HNRNPFP52597 415 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 MMRN1Q13201 1228 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 SELENBP1Q13228 472 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 CYS1Q717R9 158 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF534Q76KX8 674 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 CYP2U1Q7Z449 544 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 SREK1Q8WXA9 508 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 TOP1MTQ969P6 601 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 CNOT6Q9ULM6 557 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 IFT52Q9Y366 437 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PTPRJQ12913 1337 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 ANKRD34BA5PLL1 514 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 JRKO75564 520 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 BMP2P12643 396 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 IDUAP35475 653 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PSMD8P48556 350 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 TNK2Q07912 1038 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 BTLAQ7Z6A9 289 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 COLGALT2Q8IYK4 626 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 CNTD1Q8N815 330 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PDPRQ8NCN5 879 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 LPGAT1Q92604 370 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 RTP4Q96DX8 246 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PPP1R36Q96LQ0 422 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF347Q96SE7 839 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 OSBPL10Q9BXB5 764 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 RSAD1Q9HA92 442 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 CYP26B1Q9NR63 512 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 TCAF1Q9Y4C2 921 aa14.89□□□□□ -0.03
VPS9D1-201ENST00000389386 PIK3R2O00459 728 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 NOL3O60936 208 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 NR3C2P08235 984 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 MATN1P21941 496 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TMBIM6P55061 237 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TMEM198Q66K66 360 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TMCO5AQ8N6Q1 288 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF280CQ8ND82 737 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TUBA1CQ9BQE3 449 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms