RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PRKCHP24723 683 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 WASP42768 502 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 STK19P49842 368 aaPredicted RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 SERPINH1P50454 418 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 PEX5P50542 639 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 SATB1Q01826 763 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 CAMK2GQ13555 558 aaPredicted RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 TFDP2Q14188 446 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 PAFAH1B3Q15102 231 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 ANGPT1Q15389 498 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 TAZQ16635 292 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 HNRNPA1L2Q32P51 320 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 NCBP2-AS2Q69YL0 99 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 CCDC50Q8IVM0 306 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 NPWQ8N729 165 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 TSTD1Q8NFU3 115 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 KRT35Q92764 455 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 HMCESQ96FZ2 354 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 HES6Q96HZ4 224 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 CELF6Q96J87 481 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 CCDC114Q96M63 670 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 CEP44Q9C0F1 390 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 SLC39A8Q9C0K1 460 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 IRF2BPLQ9H1B7 796 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 SLCO3A1Q9UIG8 710 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 EFR3BQ9Y2G0 817 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 RAD54BQ9Y620 910 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 DFFAO00273 331 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 APOL1O14791 398 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 FTCDO95954 541 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 SRCP12931 536 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 MX2P20592 715 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 CDKN2BP42772 138 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 MARCKSL1P49006 195 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 ARF5P84085 180 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 FOXK2Q01167 660 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
PCNA-201ENST00000379143 IL10RBQ08334 325 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 DLG2Q15700 870 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 PPP2R5EQ16537 467 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 TMCO4Q5TGY1 634 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 SLC9A4Q6AI14 798 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 MFSD7Q6UXD7 560 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 SPOCD1Q6ZMY3 1216 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 BZW1Q7L1Q6 419 aaKnown RBP12.16□□□□□ -0.46
PCNA-201ENST00000379143 RFX6Q8HWS3 928 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 ARHGAP12Q8IWW6 846 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 ATOH1Q92858 354 aaPredicted RBP12.16□□□□□ -0.46
PCNA-201ENST00000379143 ISG20Q96AZ6 181 aaKnown RBP12.16□□□□□ -0.46
PCNA-201ENST00000379143 SP110Q9HB58 689 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 ETNK2Q9NVF9 386 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 EBF1Q9UH73 591 aa12.16□□□□□ -0.46
PCNA-201ENST00000379143 TCRBV21S2A2A0A5A6 115 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 TTC34A8MYJ7 566 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 K7ESF4 209 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 RNASEH1O60930 286 aaKnown RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 MT-CO1P00395 513 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 HLA-EP13747 358 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 GLDCP23378 1020 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 PTPN7P35236 360 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 NR2C2P49116 596 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 NUMBP49757 651 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 MEI1Q5TIA1 1274 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 TIGD7Q6NT04 549 aaPredicted RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 LINGO4Q6UY18 593 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 RASSF3Q86WH2 238 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 REXO1L1PQ8IX06 675 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 ATPAF2Q8N5M1 289 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 PCDH20Q8N6Y1 951 aaKnown RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 PQLC3Q8N755 202 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 OR2T3Q8NH03 318 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 FRS2Q8WU20 508 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 ZNF599Q96NL3 588 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 HHIPQ96QV1 700 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 PDFQ9HBH1 243 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 CD248Q9HCU0 757 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 C2orf42Q9NWW7 574 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 BCCIPQ9P287 314 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCNA-201ENST00000379143 UBA2Q9UBT2 640 aaPredicted RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 IPO11Q9UI26 975 aaKnown RBP12.15□□□□□ -0.46
PCNA-201ENST00000379143 ATG2BQ96BY7 2078 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 ZNF292O60281 2723 aa12.15□□□□□ -0.46
PCNA-201ENST00000379143 RIF1Q5UIP0 2472 aaKnown RBP12.14□□□□□ -0.47
PCNA-201ENST00000379143 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
PCNA-201ENST00000379143 PROB1E7EW31 1015 aa12.14□□□□□ -0.47
PCNA-201ENST00000379143 H0Y858 1186 aa12.14□□□□□ -0.47
PCNA-201ENST00000379143 ALOX15BO15296 676 aa12.14□□□□□ -0.47
PCNA-201ENST00000379143 DDX3YO15523 660 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms