RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 USP46P62068 366 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PDK4Q16654 411 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 DGCR14Q96DF8 476 aaKnown RBP9.97□□□□□ -0.81
SPEN-201ENST00000375759 SLC9A7Q96T83 725 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
SPEN-201ENST00000375759 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 WFS1O76024 890 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 IL2P60568 153 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 CYP20A1Q6UW02 462 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.97□□□□□ -0.81
SPEN-201ENST00000375759 ZNF540Q8NDQ6 660 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 C2CD2LO14523 706 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 MLYCDO95822 493 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PRG2P13727 222 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 CASP5P51878 434 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 ADIGQ0VDE8 80 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 CXXC5Q7LFL8 322 aaKnown RBP9.97□□□□□ -0.81
SPEN-201ENST00000375759 RPL3P39023 403 aaKnown RBP9.97□□□□□ -0.81
SPEN-201ENST00000375759 CCDC28BQ9BUN5 200 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 CDHR5Q9HBB8 845 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PLA2G4CQ9UP65 541 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PCDHGC5Q9Y5F6 944 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 SAGE2PA6NJ88 616 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 GNASQ5JWF2 1037 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 FBXO47Q5MNV8 452 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 CHPFQ8IZ52 775 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 MREGQ8N565 214 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 KIAA0895Q8NCT3 520 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 NEK6Q9HC98 313 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PHF11Q9UIL8 331 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 HOXA2O43364 376 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PIGNO95427 931 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 ENO2P09104 434 aaPredicted RBP9.97□□□□□ -0.81
SPEN-201ENST00000375759 OR1E1P30953 314 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 FBXO33Q7Z6M2 555 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 PROSER1Q86XN7 944 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 HDAC7Q8WUI4 952 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 ZNF606Q8WXB4 792 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 GPATCH2LQ9NWQ4 482 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 LEF1Q9UJU2 399 aaPredicted RBP9.97□□□□□ -0.81
SPEN-201ENST00000375759 SNX6Q9UNH7 406 aa9.97□□□□□ -0.81
SPEN-201ENST00000375759 FAM92AA1XBS5 289 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 TBX2Q13207 712 aaPredicted RBP9.96□□□□□ -0.81
SPEN-201ENST00000375759 ZCCHC23Q6ZST2 131 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 GIPC3Q8TF64 312 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 OSGEPL1Q9H4B0 414 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 TSPAN16Q9UKR8 245 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 H3BNX3 289 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 PAEPP09466 180 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 TTMPQ5BVD1 217 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 OFCC1Q8IZS5 231 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 SMYD1Q8NB12 490 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 RP9Q8TA86 221 aaKnown RBP9.96□□□□□ -0.81
SPEN-201ENST00000375759 FAM126AQ9BYI3 521 aaPredicted RBP9.96□□□□□ -0.81
SPEN-201ENST00000375759 ZNF70Q9UC06 446 aaPredicted RBP9.96□□□□□ -0.81
SPEN-201ENST00000375759 LYVE1Q9Y5Y7 322 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 SQORQ9Y6N5 450 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 GSAPA4D1B5 854 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 VAPBO95292 243 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 TSHRP16473 764 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 AKIRIN2Q53H80 203 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 STAG3L4Q8TBR4 150 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 PHF10Q8WUB8 498 aaKnown RBP9.96□□□□□ -0.81
SPEN-201ENST00000375759 UBE2E3Q969T4 207 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 RMI1Q9H9A7 625 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 PRPF19Q9UMS4 504 aaKnown RBP9.96□□□□□ -0.81
SPEN-201ENST00000375759 SSR3Q9UNL2 185 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 ZBTB14O43829 449 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 CHRNGP07510 517 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 COX7A2P14406 83 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 DPYSQ14117 519 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 DPYSL3Q14195 570 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 INSCQ1MX18 579 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 DENND5AQ6IQ26 1287 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 ZSWIM2Q8NEG5 633 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 PERM1Q5SV97 790 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 DNAJC18Q9H819 358 aa9.96□□□□□ -0.81
SPEN-201ENST00000375759 CLUHO75153 1309 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 COX4I1P13073 169 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 FOLH1Q04609 750 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 NFIXQ14938 502 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 MEA1Q16626 185 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 BHLHB9Q6PI77 547 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 CLYBLQ8N0X4 340 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 SMARCD1Q96GM5 515 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 TBCDQ9BTW9 1192 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 A0A087WZ62 844 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 UMPSP11172 480 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 MYL9P24844 172 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 POLR2LP62875 67 aaKnown RBP9.96□□□□□ -0.82
SPEN-201ENST00000375759 DLG4P78352 724 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 TAF13Q15543 124 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 ZNF554Q86TJ5 538 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 PRDM8Q9NQV8 689 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 IRGMA1A4Y4 181 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 HIST1H2ABP04908 130 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 PPP4CP60510 307 aa9.96□□□□□ -0.82
SPEN-201ENST00000375759 HIST3H2AQ7L7L0 130 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms