RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 LRRC4Q9HBW1 653 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 MAN1C1Q9NR34 630 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 TLK1Q9UKI8 766 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 PIN4Q9Y237 131 aaKnown RBP18.27■□□□□ 0.52
PHF1-201ENST00000374512 DTNAQ9Y4J8 743 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.52
PHF1-201ENST00000374512 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.27■□□□□ 0.52
PHF1-201ENST00000374512 KCNK1O00180 336 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 SORBS2O94875 1100 aaKnown RBP18.27■□□□□ 0.52
PHF1-201ENST00000374512 ERCC2P18074 760 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 FOLH1Q04609 750 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 DLG1Q12959 904 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 FAM110CQ1W6H9 321 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 XKR4Q5GH76 650 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 ZNF618Q5T7W0 954 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 SIX6OS1Q8N1H7 587 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 MAPK15Q8TD08 544 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 HDAC11Q96DB2 347 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 VPS39Q96JC1 886 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 AGAP3Q96P47 875 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 OR52B2Q96RD2 323 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 ACE2Q9BYF1 805 aaPredicted RBP18.27■□□□□ 0.52
PHF1-201ENST00000374512 MRGBPQ9NV56 204 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 KLK14Q9P0G3 267 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 TSC2P49815 1807 aa18.27■□□□□ 0.51
PHF1-201ENST00000374512 MBLAC1A4D2B0 266 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 C9IYK1 514 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 PPARGP37231 505 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 GJA9P57773 515 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 RARS2Q5T160 578 aaKnown RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 UGT2A3Q6UWM9 527 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 BNC2Q6ZN30 1099 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 DLG3Q92796 817 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 DTNBP1Q96EV8 351 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 C20orf96Q9NUD7 363 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 PIGVQ9NUD9 493 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 RAB26Q9ULW5 256 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 GOLGA8QA0A0J9YX86 632 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 GOLGA8OA6NCC3 632 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 GOLGA8NF8WBI6 632 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 F2P00734 622 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 TKTP29401 623 aaKnown RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 NUDT2P50583 147 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 TPI1P60174 286 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 RFTN1Q14699 578 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 GRAMD1BQ3KR37 738 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 LINC00523Q86TU6 105 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 HIPK4Q8NE63 616 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 PDCD6IPQ8WUM4 868 aaKnown RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 PGAP3Q96FM1 320 aaPredicted RBP18.26■□□□□ 0.51
PHF1-201ENST00000374512 RHOJQ9H4E5 214 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 ZNF385DQ9H6B1 395 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 RRN3Q9NYV6 651 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 INPP5FQ9Y2H2 1132 aa18.26■□□□□ 0.51
PHF1-201ENST00000374512 TADA2AO75478 443 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 DDHD2O94830 711 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 PITX1P78337 314 aaPredicted RBP18.25■□□□□ 0.51
PHF1-201ENST00000374512 IRF9Q00978 393 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ZNF33AQ06730 810 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 NME3Q13232 169 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 UGP2Q16851 508 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ARL13BQ3SXY8 428 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 NAPEPLDQ6IQ20 393 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 DSELQ8IZU8 1212 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 PGAM4Q8N0Y7 254 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 MFSD3Q96ES6 412 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ATXN7L3BQ96GX2 97 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 AIM2O14862 343 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ZBTB24O43167 697 aaPredicted RBP18.25■□□□□ 0.51
PHF1-201ENST00000374512 DYNC1LI2O43237 492 aaPredicted RBP18.25■□□□□ 0.51
PHF1-201ENST00000374512 ZMPSTE24O75844 475 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 TFEBP19484 476 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 SERPINB5P36952 375 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 HSPA13P48723 471 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 GALNT2Q10471 571 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 CDH17Q12864 832 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 PRPSAP1Q14558 356 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 LSM12Q3MHD2 195 aaKnown RBP18.25■□□□□ 0.51
PHF1-201ENST00000374512 PIGGQ5H8A4 983 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 SYPL2Q5VXT5 272 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 SNX32Q86XE0 403 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ADCY4Q8NFM4 1077 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 NPLOC4Q8TAT6 608 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 C1QTNF1Q9BXJ1 281 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 TASP1Q9H6P5 420 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 CAB39LQ9H9S4 337 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 TMPRSS4Q9NRS4 437 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ETAA1Q9NY74 926 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 PLK2Q9NYY3 685 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 FBXW11Q9UKB1 542 aa18.25■□□□□ 0.51
PHF1-201ENST00000374512 ZNF236Q9UL36 1845 aa18.24■□□□□ 0.51
PHF1-201ENST00000374512 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
PHF1-201ENST00000374512 USP12O75317 370 aa18.24■□□□□ 0.51
PHF1-201ENST00000374512 LTFP02788 710 aa18.24■□□□□ 0.51
PHF1-201ENST00000374512 GRIA4P48058 902 aa18.24■□□□□ 0.51
PHF1-201ENST00000374512 PEX6Q13608 980 aa18.24■□□□□ 0.51
PHF1-201ENST00000374512 SLC12A1Q13621 1099 aa18.24■□□□□ 0.51
PHF1-201ENST00000374512 SNX17Q15036 470 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms