RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 CAMK2GQ13555 558 aaPredicted RBP18.71■□□□□ 0.59
PBX3-202ENST00000373482 DLG2Q15700 870 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 HNRNPA1L2Q32P51 320 aaKnown RBP18.71■□□□□ 0.59
PBX3-202ENST00000373482 AFMIDQ63HM1 303 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 ANO7Q6IWH7 933 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 LINGO4Q6UY18 593 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 METTL3Q86U44 580 aaKnown RBP18.71■□□□□ 0.59
PBX3-202ENST00000373482 CCDC50Q8IVM0 306 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 NPWQ8N729 165 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 UBL4BQ8N7F7 174 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 PRSS33Q8NF86 280 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 EXD1Q8NHP7 514 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 PCDH19Q8TAB3 1148 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 HMGB4Q8WW32 186 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 ERLEC1Q96DZ1 483 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 CCDC114Q96M63 670 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 RNF157Q96PX1 679 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 KLC2Q9H0B6 622 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 EBF1Q9UH73 591 aa18.71■□□□□ 0.59
PBX3-202ENST00000373482 C3orf70A6NLC5 250 aaPredicted RBP18.7■□□□□ 0.58
PBX3-202ENST00000373482 H0Y858 1186 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 TDGF1P13385 188 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 ZFXP17010 805 aaPredicted RBP18.7■□□□□ 0.58
PBX3-202ENST00000373482 CETN2P41208 172 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 PAPOLAP51003 745 aaKnown RBP18.7■□□□□ 0.58
PBX3-202ENST00000373482 RWDD2BP57060 319 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
PBX3-202ENST00000373482 NCBP2-AS2Q69YL0 99 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 HEATR6Q6AI08 1181 aaKnown RBP18.7■□□□□ 0.58
PBX3-202ENST00000373482 RFX6Q8HWS3 928 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 ARHGAP12Q8IWW6 846 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 CASKIN2Q8WXE0 1202 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 KRT35Q92764 455 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 SP110Q9HB58 689 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 PRSS16Q9NQE7 514 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 MFHAS1Q9Y4C4 1052 aa18.7■□□□□ 0.58
PBX3-202ENST00000373482 FARP1Q9Y4F1 1045 aaPredicted RBP18.7■□□□□ 0.58
PBX3-202ENST00000373482 APOL1O14791 398 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 AXIN1O15169 862 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 RNASEH1O60930 286 aaKnown RBP18.69■□□□□ 0.58
PBX3-202ENST00000373482 FTCDO95954 541 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 MT-CO1P00395 513 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 GABRG2P18507 467 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 RECQLP46063 649 aaPredicted RBP18.69■□□□□ 0.58
PBX3-202ENST00000373482 MARCKSL1P49006 195 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 PXNP49023 591 aaPredicted RBP18.69■□□□□ 0.58
PBX3-202ENST00000373482 COPS2P61201 443 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 TFDP2Q14188 446 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 TFDP3Q5H9I0 405 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 C22orf39Q6P5X5 142 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 ZC3H14Q6PJT7 736 aaKnown RBP18.69■□□□□ 0.58
PBX3-202ENST00000373482 MFSD7Q6UXD7 560 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 SPOCD1Q6ZMY3 1216 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 WDR5BQ86VZ2 330 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 LONP2Q86WA8 852 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 RASSF3Q86WH2 238 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 LRRC49Q8IUZ0 686 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 MDGA1Q8NFP4 955 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 OR2T3Q8NH03 318 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 FRS2Q8WU20 508 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 PTPRN2Q92932 1015 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 CEP44Q9C0F1 390 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 ZSCAN32Q9NX65 697 aa18.69■□□□□ 0.58
PBX3-202ENST00000373482 MFSD11O43934 449 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 SIN3BO75182 1162 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 NDUFV2P19404 249 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 CDKN2BP42772 138 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 FNTBP49356 437 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 IL10RBQ08334 325 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 TCF15Q12870 199 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 INO80DQ53TQ3 878 aaPredicted RBP18.68■□□□□ 0.58
PBX3-202ENST00000373482 C9orf64Q5T6V5 341 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 TMPRSS6Q8IU80 811 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 ATPAF2Q8N5M1 289 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 PCDH20Q8N6Y1 951 aaKnown RBP18.68■□□□□ 0.58
PBX3-202ENST00000373482 PQLC3Q8N755 202 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 TRIM58Q8NG06 486 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 PRCCQ92733 491 aaPredicted RBP18.68■□□□□ 0.58
PBX3-202ENST00000373482 TPSD1Q9BZJ3 242 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 MTG2Q9H4K7 406 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 CD248Q9HCU0 757 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 UBA2Q9UBT2 640 aaPredicted RBP18.68■□□□□ 0.58
PBX3-202ENST00000373482 IPO11Q9UI26 975 aaKnown RBP18.68■□□□□ 0.58
PBX3-202ENST00000373482 PCDHGA2Q9Y5H1 932 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 WDFY4Q6ZS81 3184 aa18.68■□□□□ 0.58
PBX3-202ENST00000373482 ABCA7Q8IZY2 2146 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 K7ERQ8 282 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 SMAD6O43541 496 aaKnown RBP18.67■□□□□ 0.58
PBX3-202ENST00000373482 BNIP3LO60238 219 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 PRAMEF11O60813 436 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 ACADMP11310 421 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 MX2P20592 715 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 PEX5P50542 639 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 COPAP53621 1224 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 DMWDQ09019 674 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 BYSLQ13895 437 aaKnown RBP18.67■□□□□ 0.58
PBX3-202ENST00000373482 ELAVL3Q14576 367 aaKnown RBP18.67■□□□□ 0.58
PBX3-202ENST00000373482 PPP2R5EQ16537 467 aa18.67■□□□□ 0.58
PBX3-202ENST00000373482 KAZNQ674X7 775 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms