RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 C17orf99Q6UX52 265 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 FCRL3Q96P31 734 aaPredicted RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 DEFB118Q96PH6 123 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 ABCG8Q9H221 673 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 ADA2Q9NZK5 511 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 ACTL7AQ9Y615 435 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 C9JVG2 144 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 DDHD2O94830 711 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 OR1D2P34982 312 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 GRM3Q14832 879 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 TSNAXIP1Q2TAA8 658 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 RABGAP1LQ5R372 815 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 MTBPQ96DY7 904 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 PPP1R10Q96QC0 940 aaKnown RBP13.42□□□□□ -0.26
NCDN-203ENST00000373253 OXCT2Q9BYC2 517 aaPredicted RBP13.42□□□□□ -0.26
NCDN-203ENST00000373253 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
NCDN-203ENST00000373253 ERI2A8K979 691 aaKnown RBP13.42□□□□□ -0.26
NCDN-203ENST00000373253 J3KR12 359 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 KRT36O76013 467 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 PROCP04070 461 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 ACLYP53396 1101 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 CDH13P55290 713 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 CDK16Q00536 496 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 ART3Q13508 389 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 DENND1CQ8IV53 801 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 PSMG2Q969U7 264 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 YIPF3Q9GZM5 350 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 RNF208Q9H0X6 261 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 ATP11BQ9Y2G3 1177 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 PCDHB5Q9Y5E4 795 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 GFAPP14136 432 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 IFNEQ86WN2 208 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 DDIASQ8IXT1 998 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 OR52K2Q8NGK3 314 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 ATP6V1E2Q96A05 226 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 NMRAL1Q9HBL8 299 aa13.42□□□□□ -0.26
NCDN-203ENST00000373253 GIPC1O14908 333 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 DNAJC8O75937 253 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 KIF19Q2TAC6 998 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 FAM13CQ8NE31 585 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 RNF217Q8TC41 542 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 SEMA3CQ99985 751 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 OSBPL1AQ9BXW6 950 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 ABCC13Q9NSE7 274 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 TNS1Q9HBL0 1735 aaKnown RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 CA12O43570 354 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 RAMP2O60895 175 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 PIGNO95427 931 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 CHRNGP07510 517 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 STMN1P16949 149 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 PAMP19021 973 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 NUDT2P50583 147 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 WNT3AP56704 352 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 POLD3Q15054 466 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 MAPRE1Q15691 268 aaKnown RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 UPP1Q16831 310 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 PKDCCQ504Y2 493 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 ACVR1CQ8NER5 493 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 TBL1YQ9BQ87 522 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 FRMD8Q9BZ67 464 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 GPAMQ9HCL2 828 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 ACOT9Q9Y305 439 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 KCTD3Q9Y597 815 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 BHMG1C9JSJ3 638 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 TLR5O60602 858 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 RASSF9O75901 435 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 HOXD10P28358 340 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 PTPN4P29074 926 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 KCNQ1P51787 676 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 XRCC4Q13426 336 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 GSTCDQ8NEC7 633 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 C10orf82Q8WW14 230 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 BRD8Q9H0E9 1235 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 HMX1Q9NP08 348 aaPredicted RBP13.41□□□□□ -0.26
NCDN-203ENST00000373253 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
NCDN-203ENST00000373253 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 RFPL1O75677 317 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 TCEA3O75764 348 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 BPGMP07738 259 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 PKNOX1P55347 436 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 SLC10A7Q0GE19 358 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 PLD1Q13393 1074 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 SCIMPQ6UWF3 145 aa13.4□□□□□ -0.26
NCDN-203ENST00000373253 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
NCDN-203ENST00000373253 CCDC117Q8IWD4 279 aaPredicted RBP13.4□□□□□ -0.26
NCDN-203ENST00000373253 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
NCDN-203ENST00000373253 OR7D4Q8NG98 312 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms