RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 RBM22Q9NW64 420 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 DONSONQ9NYP3 566 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 HOXA2O43364 376 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 PLIN3O60664 434 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 GSRP00390 522 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 RHOQP17081 205 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 NMBRP28336 390 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 LIMK2P53671 638 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 OCRLQ01968 901 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 STX3Q13277 289 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 ANO4Q32M45 955 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 PCID2Q5JVF3 399 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 C16orf46Q6P387 395 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 FUT10Q6P4F1 479 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 CLNKQ7Z7G1 428 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 UMODL1-AS1Q8N2C9 162 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 KIF2BQ8N4N8 673 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 DCLK2Q8N568 766 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 ATP6V0D2Q8N8Y2 350 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 ISL2Q96A47 359 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 ZYG11BQ9C0D3 744 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 TLR8Q9NR97 1041 aaKnown RBP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 PPARGC1AQ9UBK2 798 aaKnown RBP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 IPO11Q9UI26 975 aaKnown RBP13.63□□□□□ -0.23
CSTF2-201ENST00000372972 EMCNQ9ULC0 261 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 TRIM33Q9UPN9 1127 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
CSTF2-201ENST00000372972 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TBKBP1A7MCY6 615 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 H7C4K7 107 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SNNO75324 88 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 NEBLO76041 1014 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 T-ENOLP0DO92 83 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 MAGEA12P43365 314 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SERPINB8P50452 374 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 RASSF2P50749 326 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 NDST2P52849 883 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 CSE1LP55060 971 aaKnown RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 IRX4P78413 519 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TRIP4Q15650 581 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SNCBQ16143 134 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 MGAT5BQ3V5L5 792 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 FASTKD1Q53R41 847 aaKnown RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 MS4A13Q5J8X5 152 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 PPM1JQ5JR12 505 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 CES4AQ5XG92 561 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 FSTL4Q6MZW2 842 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 PKN3Q6P5Z2 889 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 FBXO46Q6PJ61 603 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 CRLF3Q8IUI8 442 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SUGP1Q8IWZ8 645 aaKnown RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 IPMKQ8NFU5 416 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 PPP1R14CQ8TAE6 165 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 ZNF419Q96HQ0 510 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 BTN2A3PQ96KV6 586 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SPATA17Q96L03 361 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 PRDM5Q9NQX1 630 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 ENTPD7Q9NQZ7 604 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SNX15Q9NRS6 342 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 COMMD8Q9NX08 183 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 NSMCE4AQ9NXX6 385 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 KCNK4Q9NYG8 393 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TBX21Q9UL17 535 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SHROOM3Q8TF72 1996 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TIMM44O43615 452 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TBC1D4O60343 1298 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 DNAJC6O75061 913 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 SOAT2O75908 522 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TBX18O95935 607 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 HLA-DQB2P05538 268 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 KRT16P08779 473 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 MYL2P10916 166 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 ZBTB16Q05516 673 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 CDK18Q07002 472 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TAF10Q12962 218 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 MPP3Q13368 585 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 RIPK1Q13546 671 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 PDPK2PQ6A1A2 396 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 POTEHQ6S545 545 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 RSPO2Q6UXX9 243 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 RNF19BQ6ZMZ0 732 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.236e-6■■■□□ 19.1
CSTF2-201ENST00000372972 CCDC117Q8IWD4 279 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 INPP5DQ92835 1189 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TMEM175Q9BSA9 504 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 TUBB6Q9BUF5 446 aa13.62□□□□□ -0.23
CSTF2-201ENST00000372972 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
CSTF2-201ENST00000372972 LRMDAQ9H2I8 198 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms