RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RABGEF1Q9UJ41 708 aa15.06■□□□□ 0
VAMP4-202ENST00000367740 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
VAMP4-202ENST00000367740 XPO1O14980 1071 aaKnown RBP15.05■□□□□ -0
VAMP4-202ENST00000367740 MCF2LO15068 1137 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 GCATO75600 419 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 CTSLP07711 333 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 JUNDP17535 347 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 CCKBRP32239 447 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 ETV5P41161 510 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 TBX4P57082 545 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 SLC8A3P57103 927 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 RBFAQ8N0V3 343 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 SPATA20Q8TB22 786 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 GLMNQ92990 594 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 FCRL2Q96LA5 508 aaPredicted RBP15.05■□□□□ -0
VAMP4-202ENST00000367740 GFM1Q96RP9 751 aaKnown RBP15.05■□□□□ -0
VAMP4-202ENST00000367740 DDX50Q9BQ39 737 aaKnown RBP15.05■□□□□ -0
VAMP4-202ENST00000367740 IMPG2Q9BZV3 1241 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 DNAI2Q9GZS0 605 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 LRRC4Q9HBW1 653 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 ZNF71Q9NQZ8 489 aaPredicted RBP15.05■□□□□ -0
VAMP4-202ENST00000367740 TMPRSS4Q9NRS4 437 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 PADI4Q9UM07 663 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 PCDHB11Q9Y5F2 797 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 HS3ST3A1Q9Y663 406 aa15.05■□□□□ -0
VAMP4-202ENST00000367740 A0A1W2PQ27 194 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 A0A1W2PQ64 194 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 A0A1W2PQC6 194 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 TMX2-CTNND1H3BSU7 103 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 SPINT1O43278 529 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 ATP9BO43861 1147 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 RAD23BP54727 409 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 DAOAP59103 153 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 EIF2B5Q13144 721 aaKnown RBP15.04■□□□□ -0
VAMP4-202ENST00000367740 PDE1CQ14123 709 aaPredicted RBP15.04■□□□□ -0
VAMP4-202ENST00000367740 FGL2Q14314 439 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 E2F4Q16254 413 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 KNOP1Q1ED39 458 aaKnown RBP15.04■□□□□ -0
VAMP4-202ENST00000367740 GOLGA7BQ2TAP0 167 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 TMC2Q8TDI7 906 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 TAS1R2Q8TE23 839 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 TCEAL2Q9H3H9 227 aaPredicted RBP15.04■□□□□ -0
VAMP4-202ENST00000367740 DMAC2Q9NW81 257 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 ITPR3Q14573 2671 aa15.04■□□□□ -0
VAMP4-202ENST00000367740 A0A1W2PQM1 296 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 C9orf172C9J069 976 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 RNF103O00237 685 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 IKBKBO14920 756 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 RAD51BO15315 384 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 MTSS1O43312 755 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 PCDH8O95206 1070 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 PDGFRAP16234 1089 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 ZNF18P17022 549 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 RABIFP47224 123 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
VAMP4-202ENST00000367740 SULT2A1Q06520 285 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 SLC12A1Q13621 1099 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 ACCSLQ4AC99 568 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 CNNM4Q6P4Q7 775 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 ATCAYQ86WG3 371 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 SIX6OS1Q8N1H7 587 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 C9orf43Q8TAL5 461 aaPredicted RBP15.03■□□□□ -0
VAMP4-202ENST00000367740 ERCC4Q92889 916 aaPredicted RBP15.03■□□□□ -0
VAMP4-202ENST00000367740 CCDC74AQ96AQ1 378 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 LRRC61Q9BV99 259 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 LRRC27Q9C0I9 530 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 SPASTQ9UBP0 616 aa15.03■□□□□ -0
VAMP4-202ENST00000367740 APOBEC3BQ9UH17 382 aaKnown RBP15.03■□□□□ -0
VAMP4-202ENST00000367740 XPO7Q9UIA9 1087 aaKnown RBP15.03■□□□□ -0
VAMP4-202ENST00000367740 PNMA8BQ9ULN7 279 aaPredicted RBP15.03■□□□□ -0
VAMP4-202ENST00000367740 UNC13CQ8NB66 2214 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.02■□□□□ -0
VAMP4-202ENST00000367740 LMO7DNF2Z398 122 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 AGRPO00253 132 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 AGFG2O95081 481 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 RPLP0P05388 317 aaKnown RBP15.02■□□□□ -0
VAMP4-202ENST00000367740 RNF224P0DH78 156 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 UQCRFS1P47985 274 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 ADKP55263 362 aaKnown RBP15.02■□□□□ -0
VAMP4-202ENST00000367740 CCL7P80098 99 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 BST2Q10589 180 aaKnown RBP15.02■□□□□ -0
VAMP4-202ENST00000367740 C1orf61Q13536 156 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 DLG2Q15700 870 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 PRRT3Q5FWE3 981 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 ZNF787Q6DD87 383 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 SLC9A9Q8IVB4 645 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 LGI2Q8N0V4 545 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 SCML4Q8N228 414 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 SDR16C5Q8N3Y7 309 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 GOLGA5Q8TBA6 731 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 JPH3Q8WXH2 748 aaPredicted RBP15.02■□□□□ -0
VAMP4-202ENST00000367740 USP7Q93009 1102 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 TMEM74Q96NL1 305 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 CPEB1Q9BZB8 566 aaKnown RBP15.02■□□□□ -0
VAMP4-202ENST00000367740 SLC39A2Q9NP94 309 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 CNGB3Q9NQW8 809 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 CISHQ9NSE2 258 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 TSPAN16Q9UKR8 245 aa15.02■□□□□ -0
VAMP4-202ENST00000367740 MED13Q9UHV7 2174 aa15.02□□□□□ -0.01
VAMP4-202ENST00000367740 LRP4O75096 1905 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms