RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RBMX2Q9Y388 322 aaKnown RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 PRDM15P57071 1507 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 IL12AP29459 219 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 CDH8P55286 799 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF484Q5JVG2 852 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 ALKBH2Q6NS38 261 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 HHIPL2Q6UWX4 724 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 DAGLBQ8NCG7 672 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 KRT36O76013 467 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 SLC26A3P40879 764 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 PTPN5P54829 565 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 TOP3AQ13472 1001 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 FAM171BQ6P995 826 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 LRRN4Q8WUT4 740 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 RNF19AQ9NV58 838 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 MAT2BQ9NZL9 334 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 TRIM3O75382 744 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 KLRK1P26718 216 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 PTDSS1P48651 473 aaKnown RBP16.25■□□□□ 0.19
COL18A1-203ENST00000359759 OR52L1Q8NGH7 329 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 MBOAT7Q96N66 472 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 SLC25A23Q9BV35 468 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 GDF3Q9NR23 364 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
COL18A1-203ENST00000359759 ALADP13716 330 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■□□□□ 10.4
COL18A1-203ENST00000359759 OMPP47874 163 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 GNA13Q14344 377 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 POM121L1PQ3SYA9 428 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ZDHHC6Q9H6R6 413 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ZFP14Q9HCL3 533 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ADGRL3Q9HAR2 1447 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 BUD23O43709 281 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 RBL1P28749 1068 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 MSLNQ13421 630 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 LIN54Q6MZP7 749 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 NET1Q7Z628 596 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ACER1Q8TDN7 264 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 TNKS2Q9H2K2 1166 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 TRIT1Q9H3H1 467 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 H7C0S8 307 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ZBTB14O43829 449 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 RFX4Q33E94 735 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 CD302Q8IX05 232 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 SPATA6LQ8N4H0 392 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 FAR1Q8WVX9 515 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 BPIFA1Q9NP55 256 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 FBXO6Q9NRD1 293 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 NCAM2O15394 837 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 KPNA6O60684 536 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 RGS20O76081 388 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 USP17L7P0C7H9 530 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 CETPP11597 493 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 RPL4P36578 427 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 POU5F1Q01860 360 aaKnown RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 FAM187BQ17R55 369 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 LY6KQ17RY6 165 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 HYIQ5T013 277 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 FBXW8Q8N3Y1 598 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 RENBPP51606 427 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ATN1P54259 1190 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-203ENST00000359759 PRKAA2P54646 552 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 SPESP1Q6UW49 350 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 LRRC17Q8N6Y2 441 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 MYLPFQ96A32 169 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 GLT1D1Q96MS3 346 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 NDNQ99608 321 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 PLA2G12BQ9BX93 195 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 DEFB129Q9H1M3 183 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF304Q9HCX3 659 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 SAR1AQ9NR31 198 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 CHST7Q9NS84 486 aa16.24■□□□□ 0.19
COL18A1-203ENST00000359759 CHRNGP07510 517 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SPIBQ01892 262 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 IL18R1Q13478 541 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 FNDC3BQ53EP0 1204 aaKnown RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 FBXO47Q5MNV8 452 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 MARK2Q7KZI7 788 aaKnown RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 BRSK2Q8IWQ3 736 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 CYP4X1Q8N118 509 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SCAIQ8N9R8 606 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 PMM1Q92871 262 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ING4Q9UNL4 249 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ANKDD1BA6NHY2 528 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ACSL4O60488 711 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ULK3Q6PHR2 472 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ABRAXAS1Q6UWZ7 409 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ELMO1Q92556 727 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SPATA31A3Q5VYP0 1347 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 FAM92AA1XBS5 289 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ANPEPP15144 967 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ADSSP30520 456 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 NTSP30990 170 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 DPYSL3Q14195 570 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms