RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SFTPA1Q8IWL2 248 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ATPAF2Q8N5M1 289 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 CCNYQ8ND76 341 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ATG4AQ8WYN0 398 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 FAM118BQ9BPY3 351 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 AP1M1Q9BXS5 423 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ARHGEF3Q9NR81 526 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 DNPEPQ9ULA0 475 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 CA14Q9ULX7 337 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 DRG1Q9Y295 367 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZDBF2Q9HCK1 2354 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 BCLAF3A2AJT9 711 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 H7C0C1 242 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 K7EQS6 105 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 CBX4O00257 560 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 MCF2LO15068 1137 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 MATN3O15232 486 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 PEX11BO96011 259 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ASLP04424 464 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ATP5BP06576 529 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 CTSOP43234 321 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ATP5OP48047 213 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 NUMBP49757 651 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ECT2LQ008S8 904 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 GRSF1Q12849 480 aaKnown RBP eCLIP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 OASLQ15646 514 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 INO80DQ53TQ3 878 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 SLC45A4Q5BKX6 768 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 TIGD7Q6NT04 549 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 RETSATQ6NUM9 610 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 BMP8AQ7Z5Y6 402 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 C12orf50Q8NA57 414 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 MAML1Q92585 1016 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 SHDQ96IW2 340 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 MRGPRX3Q96LB0 322 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZNF599Q96NL3 588 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 QKIQ96PU8 341 aaKnown RBP eCLIP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 USP29Q9HBJ7 922 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 HCN2Q9UL51 889 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 MT-CO1P00395 513 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 DLDP09622 509 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 GEMIN4P57678 1058 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 SIGLEC14Q08ET2 396 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 AP1B1Q10567 949 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 PTPRNQ16849 979 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 DNTTIP2Q5QJE6 756 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 DARS2Q6PI48 645 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 TEX26Q8N6G2 289 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 UCMAQ8WVF2 138 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 SORCS1Q8WY21 1168 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 MAGOHBQ96A72 148 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 CIPCQ9C0C6 399 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 SP110Q9HB58 689 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 FBXL21Q9UKT6 434 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 ERVW-1Q9UQF0 538 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 HS3ST2Q9Y278 367 aa12.65□□□□□ -0.38
NIF3L1-201ENST00000359683 GOLGA6L10A0A0M3HER8 536 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CCDC188H7C350 402 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF189O75820 626 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 EGFP01133 1207 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 ITGAVP06756 1048 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 HNRNPLP14866 589 aaKnown RBP eCLIP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 VAV1P15498 845 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CD72P21854 359 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 RBL1P28749 1068 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 STIP1P31948 543 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 KIR2DL1P43626 348 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 IFI35P80217 286 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 SNX1Q13596 522 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 RFTN1Q14699 578 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 FBXO43Q4G163 708 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 LINGO4Q6UY18 593 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CDKL3Q8IVW4 592 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 KDM1BQ8NB78 822 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 SPATA4Q8NEY3 305 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CYB5D2Q8WUJ1 264 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 MYO19Q96H55 970 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 RPL10LQ96L21 214 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 NELL2Q99435 816 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 IL12RB2Q99665 862 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 C10orf88Q9H8K7 445 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms