RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLC45A3Q96JT2 553 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF696Q9H7X3 374 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 MORF4L1Q9UBU8 362 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 EBF1Q9UH73 591 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 VANGL2Q9ULK5 521 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SNX10Q9Y5X0 201 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 PRSS51A0A1B0GVH4 220 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ATP6AP2A0A1C7CYW4 349 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ARHGAP10A1A4S6 786 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 TCAF2A6NFQ2 919 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SAC3D1A6NKF1 404 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FAM72CH0Y354 149 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ATP6AP2O75787 350 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 STAMBPO95630 424 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 GNAO1P09471 354 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SBK3P0C264 359 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 DESP17661 470 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ARF4P18085 180 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 LMO2P25791 158 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 NMBRP28336 390 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 CCR3P51677 355 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 LIMK2P53671 638 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 NR1H2P55055 460 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 CTBP1Q13363 440 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 MPP3Q13368 585 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 LPIN1Q14693 890 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 USP10Q14694 798 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 CCDC153Q494R4 210 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 STXBP5Q5T5C0 1151 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ACBD5Q5T8D3 534 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FAM72AQ5TYM5 149 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FAM72DQ6L9T8 149 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FAM72BQ86X60 149 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SLC35F5Q8WV83 523 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 C18orf25Q96B23 403 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 CPNE1Q99829 537 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 RSL24D1Q9UHA3 163 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 HACL1Q9UJ83 578 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 AKT3Q9Y243 479 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 GJA3Q9Y6H8 435 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF638Q14966 1978 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SCN1AP35498 2009 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 PDLIM1O00151 329 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ACAT1P24752 427 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 BAG6P46379 1132 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SULT1E1P49888 294 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 GRTP1Q5TC63 336 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 CLVS1Q8IUQ0 354 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 DENND6AQ8IWF6 608 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FBXO16Q8IX29 292 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 DEFB106AQ8N104 65 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FAM47BQ8NA70 645 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ADCY4Q8NFM4 1077 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 RP9Q8TA86 221 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 EFCAB1Q9HAE3 211 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 OXSMQ9NWU1 459 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 XPR1Q9UBH6 696 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 PRPF19Q9UMS4 504 aaKnown RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 CDYLQ9Y232 598 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ZCWPW2A0A1B0GU75 182 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF839A8K0R7 811 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 ACOT8O14734 319 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 ZBTB24O43167 697 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-203ENST00000356147 NDUFV1P49821 464 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 INSCQ1MX18 579 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 ANKRD23Q86SG2 305 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 KCNMB4Q86W47 210 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 PGAM4Q8N0Y7 254 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 LSMEM2Q8N112 164 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 FSTL5Q8N475 847 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-203ENST00000356147 SPATA33Q96N06 139 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 FTHL17Q9BXU8 183 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 FAM96AQ9H5X1 160 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 TRPC7Q9HCX4 862 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 TNFRSF12AQ9NP84 129 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 TUBGCP4Q9UGJ1 667 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 CDC14AQ9UNH5 594 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 RAP2CQ9Y3L5 183 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 AP4S1Q9Y587 144 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 BCAS2O75934 225 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-203ENST00000356147 IL18RAPO95256 599 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 NUMBP49757 651 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 PSME3P61289 254 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 MPP1Q00013 466 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 IKBKEQ14164 716 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 CHST15Q7LFX5 561 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-203ENST00000356147 NT5DC4Q86YG4 428 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 HERC6Q8IVU3 1022 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 RNF139Q8WU17 664 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 LPGAT1Q92604 370 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 NXNL1Q96CM4 212 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 FAM210AQ96ND0 272 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 PDZD7Q9H5P4 517 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 TLK1Q9UKI8 766 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms