RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CRY1Q16526 586 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 MPZL3Q6UWV2 235 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 TSHZ1Q6ZSZ6 1077 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ATG9AQ7Z3C6 839 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 KCNMB4Q86W47 210 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ZNF611Q8N823 705 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 OR2L3Q8NG85 312 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 FRMD8Q9BZ67 464 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-201ENST00000356083 ABCC2Q92887 1545 aa17.48■□□□□ 0.39
COL27A1-201ENST00000356083 WDR27A2RRH5 827 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 FCHO1O14526 889 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 CHP2O43745 196 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 KCNA5P22460 613 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 SOX10P56693 466 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 KCNMA1Q12791 1236 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 KCTD8Q6ZWB6 473 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 DENND1CQ8IV53 801 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 SVOPQ8N4V2 548 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 NEDD1Q8NHV4 660 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 DTNBP1Q96EV8 351 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 TMEM176AQ96HP8 235 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 LRATO95237 230 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 DNASE1L1P49184 302 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 NFE2Q16621 373 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 VPS35Q96QK1 796 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 CDH9Q9ULB4 789 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 SGTAO43765 313 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 MGAT1P26572 445 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 GDI2P50395 445 aaKnown RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 RPS6KA3P51812 740 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 PAGE2BQ5JRK9 111 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 QKIQ96PU8 341 aaKnown RBP eCLIP17.47■□□□□ 0.391e-9■■■□□ 14.6
COL27A1-201ENST00000356083 BPNT1O95861 308 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 S100A6P06703 90 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 AKR1D1P51857 326 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 ATXN1P54253 815 aaKnown RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 MAD2L1Q13257 205 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 FBXO47Q5MNV8 452 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 BMPR2Q13873 1038 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 RETSATQ6NUM9 610 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 GET4Q7L5D6 327 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 ZNF677Q86XU0 584 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 PANX3Q96QZ0 392 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 RLN1P04808 185 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 CYP11B1P15538 503 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 MPP4Q96JB8 637 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 POMKQ9H5K3 350 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 UXTQ9UBK9 157 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-201ENST00000356083 RIMKLBQ9ULI2 386 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
COL27A1-201ENST00000356083 H3BRB1 525 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 SLC28A2O43868 658 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 CCDC115Q96NT0 180 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 EIF3HO15372 352 aaKnown RBP eCLIP17.46■□□□□ 0.396e-16■■■□□ 18.2
COL27A1-201ENST00000356083 PHGDHO43175 533 aaKnown RBP17.46■□□□□ 0.39
COL27A1-201ENST00000356083 ZNF806P0C7X5 589 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 TSPAN8P19075 237 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 GRSF1Q12849 480 aaKnown RBP eCLIP17.46■□□□□ 0.393e-8■■□□□ 13.7
COL27A1-201ENST00000356083 ZIK1Q3SY52 487 aaPredicted RBP17.46■□□□□ 0.39
COL27A1-201ENST00000356083 PRR23BQ6ZRT6 265 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 ZBTB10Q96DT7 871 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 CD248Q9HCU0 757 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 KMOO15229 486 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 CXCR2P25025 360 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 ZNF470Q6ECI4 717 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 VDRP11473 427 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 ALDH3A2P51648 485 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 SGCDQ92629 289 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 CISHQ9NSE2 258 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 ARMCX1Q9P291 453 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 UBE2QL1A1L167 161 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 KCNK1O00180 336 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 BUD23O43709 281 aaKnown RBP17.46■□□□□ 0.39
COL27A1-201ENST00000356083 VAPBO95292 243 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
COL27A1-201ENST00000356083 CD151P48509 253 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 PPIL2Q13356 520 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 GCNT7Q6ZNI0 430 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 SATL1Q86VE3 508 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 KAT2AQ92830 837 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 FATE1Q969F0 183 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 H3BNH8 94 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 UGT1A5P35504 534 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 LAMTOR4Q0VGL1 99 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 PDK2Q15119 407 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 NSUN4Q96CB9 384 aaKnown RBP17.46■□□□□ 0.39
COL27A1-201ENST00000356083 ASB8Q9H765 288 aa17.46■□□□□ 0.39
COL27A1-201ENST00000356083 NCAM2O15394 837 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 IFNA6P05013 189 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.387e-7■■■■□ 20.5
COL27A1-201ENST00000356083 CDH8P55286 799 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 MINDY4Q4G0A6 757 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 APTXQ7Z2E3 356 aaKnown RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 TERB1Q8NA31 727 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 CLN6Q9NWW5 311 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 PDHXO00330 501 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms