RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 BCAP31P51572 246 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 EARS2Q5JPH6 523 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 TNPO3Q9Y5L0 923 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 BMP6P22004 513 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 STARP49675 285 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF135P52742 658 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 LIN54Q6MZP7 749 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 BBIP1A8MTZ0 92 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MMP10P09238 476 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 RCVRNP35243 200 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CNPY1Q3B7I2 92 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF549Q6P9A3 640 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 SAPCD2Q86UD0 394 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ANKRD13AQ8IZ07 590 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 OFCC1Q8IZS5 231 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 SSR3Q9UNL2 185 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ERVK-10P10266 1014 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PBX1P40424 430 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 OXCT1P55809 520 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 VN1R5Q7Z5H4 357 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 LZTR1Q8N653 840 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MINDY2Q8NBR6 621 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 HTRA1Q92743 480 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MARK4Q96L34 752 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 TRPC4Q9UBN4 977 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 A0A1W2PRG6 482 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CCNE2O96020 404 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ICAM1P05362 532 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 GALNT18Q6P9A2 607 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CAMKK1Q8N5S9 505 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CERS2Q96G23 380 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 RPL22P35268 128 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PPATQ06203 517 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ENPEPQ07075 957 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 IL27RAQ6UWB1 636 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 TMEM139Q8IV31 216 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 AHI1Q8N157 1196 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 EFCAB3Q8N7B9 438 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 LNX1Q8TBB1 728 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 TUBGCP5Q96RT8 1024 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZFYVE28Q9HCC9 887 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PTPRHQ9HD43 1115 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MTRF1O75570 445 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 DHFRP00374 187 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 HPCAL1P37235 193 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 CAPGP40121 348 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PLK1P53350 603 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PTSQ03393 145 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PAGE2BQ5JRK9 111 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF621Q6ZSS3 439 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 TAAR1Q96RJ0 339 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 PFDN2Q9UHV9 154 aa12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 RBMX2Q9Y388 322 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-201ENST00000355238 UNC13AQ9UPW8 1703 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CLDN25C9JDP6 229 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 NOS3P29474 1203 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 RENBPP51606 427 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 PLET1Q6UQ28 207 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 EEF1AKMT1Q8WVE0 214 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 REXO5Q96IC2 774 aaKnown RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 GPC6Q9Y625 555 aaPredicted RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 ARP10275 920 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CYP2A7P20853 494 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 DALRD3Q5D0E6 543 aaKnown RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZBTB46Q86UZ6 589 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms