RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 PROX2Q3B8N5 592 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 BRMS1LQ5PSV4 323 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 DSG4Q86SJ6 1040 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 IQCHQ86VS3 1027 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 XYLT1Q86Y38 959 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 MYOCQ99972 504 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 ZFR2Q9UPR6 939 aaKnown RBP16.26■□□□□ 0.19
PDGFA-201ENST00000354513 FHOD1Q9Y613 1164 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 URB1O60287 2271 aaKnown RBP16.26■□□□□ 0.19
PDGFA-201ENST00000354513 E9PAM4 449 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 C1QTNF3-AMACRE9PGA6 284 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 TRIM38O00635 465 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 TLX3O43711 291 aaPredicted RBP16.25■□□□□ 0.19
PDGFA-201ENST00000354513 BNIP3LO60238 219 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 RNGTTO60942 597 aaKnown RBP16.25■□□□□ 0.19
PDGFA-201ENST00000354513 RHOCP08134 193 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 GIMD1P0DJR0 217 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 RRM1P23921 792 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 FLT3P36888 993 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 ARRB1P49407 418 aaPredicted RBP16.25■□□□□ 0.19
PDGFA-201ENST00000354513 RAB6CQ53S08 254 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 C2CD6Q53TS8 623 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 SLC45A4Q5BKX6 768 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 HES3Q5TGS1 186 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 FAM46CQ5VWP2 391 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 LINGO4Q6UY18 593 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 OXR1Q8N573 874 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 KLK6Q92876 244 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 VOPP1Q96AW1 172 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 NOX5Q96PH1 765 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 NAA15Q9BXJ9 866 aaKnown RBP16.25■□□□□ 0.19
PDGFA-201ENST00000354513 RAB6CQ9H0N0 254 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 MUC3BQ9H195 1237 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 PREBQ9HCU5 417 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 FZD3Q9NPG1 666 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDGFA-201ENST00000354513 MPP6Q9NZW5 540 aa16.25■□□□□ 0.19
PDGFA-201ENST00000354513 ZMPSTE24O75844 475 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 C1SP09871 688 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 PRLRP16471 622 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 CHRNA3P32297 505 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 KRT9P35527 623 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 NUDT1P36639 197 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 SCNN1AP37088 669 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 RNASE9P60153 205 aaKnown RBP16.24■□□□□ 0.19
PDGFA-201ENST00000354513 UBE2HP62256 183 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 MTA1Q13330 715 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 DRAP1Q14919 205 aaPredicted RBP16.24■□□□□ 0.19
PDGFA-201ENST00000354513 ZNF284Q2VY69 593 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 DPCR1Q3MIW9 517 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 SETMARQ53H47 684 aaPredicted RBP16.24■□□□□ 0.19
PDGFA-201ENST00000354513 C22orf39Q6P5X5 142 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 GCNT7Q6ZNI0 430 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 TFAP2DQ7Z6R9 452 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 ZDHHC17Q8IUH5 632 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 SLC25A45Q8N413 288 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 DCAF4L2Q8NA75 395 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 OR7D4Q8NG98 312 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 LRIG1Q96JA1 1093 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 NDST4Q9H3R1 872 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 WDCPQ9H6R7 721 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 RRN3Q9NYV6 651 aa16.24■□□□□ 0.19
PDGFA-201ENST00000354513 A0A1W2PQU0 124 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 PRAMEF26H0Y7S4 382 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 CYP11B1P15538 503 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 DEUP1Q05D60 604 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 OVGP1Q12889 678 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 TARDBPQ13148 414 aaKnown RBP eCLIP16.23■□□□□ 0.19
PDGFA-201ENST00000354513 ACAP1Q15027 740 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 SLC25A52Q3SY17 297 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 VWA3BQ502W6 1294 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 HSP90AA4PQ58FG1 418 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 SETD3Q86TU7 594 aaPredicted RBP16.23■□□□□ 0.19
PDGFA-201ENST00000354513 NOP9Q86U38 636 aaKnown RBP16.23■□□□□ 0.19
PDGFA-201ENST00000354513 SLC22A18ASQ8N1D0 253 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 MLKLQ8NB16 471 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 ATP11CQ8NB49 1132 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 RFFLQ8WZ73 363 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 NXPE2Q96DL1 559 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 PPP1R9BQ96SB3 815 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 TNKS2Q9H2K2 1166 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 LMBRD1Q9NUN5 540 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 UCKL1Q9NWZ5 548 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 TMEM59LQ9UK28 342 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 ACTL7AQ9Y615 435 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 WASF2Q9Y6W5 498 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 ANKRD36A6QL64 1941 aa16.23■□□□□ 0.19
PDGFA-201ENST00000354513 KPNA3O00505 521 aaPredicted RBP16.22■□□□□ 0.19
PDGFA-201ENST00000354513 SLC31A1O15431 190 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 SIGLEC6O43699 453 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 CD160O95971 181 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 THEGLP0DJG4 465 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 ZNF18P17022 549 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 CKMT2P17540 419 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 ACP1P24666 158 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 ITPKBP27987 946 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 NOMO3P69849 1222 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 KRT83P78385 493 aa16.22■□□□□ 0.19
PDGFA-201ENST00000354513 ARF5P84085 180 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms