RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 PTCH2Q9Y6C5 1203 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 MEI4A8MW99 385 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 PARNO95453 639 aaKnown RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 SHBGP04278 402 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 RPA3P35244 121 aaPredicted RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 TARBP2Q15633 366 aaKnown RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 ZNF438Q7Z4V0 828 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 ATG16L2Q8NAA4 619 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 RSPH1Q8WYR4 309 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 FIG4Q92562 907 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 SYT17Q9BSW7 474 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 IL1RAPL1Q9NZN1 696 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 VTI1BQ9UEU0 232 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 ANKRD6Q9Y2G4 727 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 HSPA13P48723 471 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 PSEN1P49768 467 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 HIRAP54198 1017 aaPredicted RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 PFKFB4Q16877 469 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 IRF2BP1Q8IU81 584 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 NCANO14594 1321 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 hCG_1818297A0A087WSY0 165 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 TREHO43280 583 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 XRCC4Q13426 336 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 TCHHL1Q5QJ38 904 aaPredicted RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 C9orf57Q5W0N0 161 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 KRT84Q9NSB2 600 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 OPTCQ9UBM4 332 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 PCYOX1Q9UHG3 505 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 CROTQ9UKG9 612 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 SMIM28A0A1B0GU29 152 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 RNF225M0QZC1 329 aaPredicted RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 OPLAHO14841 1288 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 CDK7P50613 346 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 RPS7P62081 194 aaKnown RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 PLEKHM3Q6ZWE6 761 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
UBE3C-201ENST00000348165 CERS2Q96G23 380 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 TMEM237Q96Q45 408 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 DUSP16Q9BY84 665 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 MAN1C1Q9NR34 630 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 NCKAP1Q9Y2A7 1128 aa18.87■□□□□ 0.61
UBE3C-201ENST00000348165 SMIM35A0A1B0GVV1 85 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 PFKPQ01813 784 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 TUSC3Q13454 348 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 CES5AQ6NT32 575 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 PRDM16Q9HAZ2 1276 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 MPP6Q9NZW5 540 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 PSMD12O00232 456 aaPredicted RBP18.86■□□□□ 0.61
UBE3C-201ENST00000348165 IFNA14P01570 189 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 CCDC166P0CW27 439 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 CCT8P50990 548 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SNRPD1P62314 119 aaKnown RBP18.86■□□□□ 0.61
UBE3C-201ENST00000348165 TBCELQ5QJ74 424 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SPPL2AQ8TCT8 520 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 TRPC4APQ8TEL6 797 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 ZNF670Q9BS34 389 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 BTBD7Q9P203 1132 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 COL20A1Q9P218 1284 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 MRASO14807 208 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SMNDC1O75940 238 aaKnown RBP eCLIP18.86■□□□□ 0.611e-9■□□□□ 10.8
UBE3C-201ENST00000348165 SPATA31D3P0C874 917 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 TNNI3P19429 210 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 KYAT3Q6YP21 454 aaKnown RBP18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SPATA31D4Q6ZUB0 917 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 TMPRSS6Q8IU80 811 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SAC3D1A6NKF1 404 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SLC9A3R1O14745 358 aaPredicted RBP18.86■□□□□ 0.61
UBE3C-201ENST00000348165 INPP4BO15327 924 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 CBX6O95503 412 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 PSMC3P17980 439 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 SNX32Q86XE0 403 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 ALG3Q92685 438 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 LRRC19Q9H756 370 aa18.86■□□□□ 0.61
UBE3C-201ENST00000348165 ATP6V1G2O95670 118 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 CST3P01034 146 aaPredicted RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 ADH1AP07327 375 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 IL27RAQ6UWB1 636 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 DET1Q7L5Y6 550 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 SLC41A1Q8IVJ1 513 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 MTFMTQ96DP5 389 aaKnown RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 NSMCE2Q96MF7 247 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 ANKRD27Q96NW4 1050 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 PRKAA2P54646 552 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 STK40Q8N2I9 435 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 MIEF2Q96C03 454 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 FCRL2Q96LA5 508 aaPredicted RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 PCDHB18PQ96TA0 734 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 CNTNAP1P78357 1384 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 HOXB8P17481 243 aaPredicted RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 DUSP4Q13115 394 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 PTPN20Q4JDL3 420 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 SERPINA13PQ6UXR4 307 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 C12orf56Q8IXR9 622 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 TOP6BLQ8N6T0 577 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 VPS51Q9UID3 782 aa18.85■□□□□ 0.61
UBE3C-201ENST00000348165 HNRNPH3P31942 346 aaKnown RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 MRPL28Q13084 256 aaKnown RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 MAD2L1Q13257 205 aaPredicted RBP18.85■□□□□ 0.61
UBE3C-201ENST00000348165 FAM126AQ9BYI3 521 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms