RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 ARTNQ5T4W7 220 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 LRRC57Q8N9N7 239 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 EXD1Q8NHP7 514 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 CASKIN2Q8WXE0 1202 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 TSC1Q92574 1164 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 ARHGEF2Q92974 986 aaKnown RBP12.1□□□□□ -0.47
SNCA-202ENST00000345009 RPL10LQ96L21 214 aaKnown RBP12.1□□□□□ -0.47
SNCA-202ENST00000345009 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
SNCA-202ENST00000345009 TMEM245Q9H330 911 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 VPS51Q9UID3 782 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 NEU3Q9UQ49 428 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 HS3ST2Q9Y278 367 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 HCN4Q9Y3Q4 1203 aa12.1□□□□□ -0.47
SNCA-202ENST00000345009 EDDM13A0A1B0GTR0 161 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 SGK1O00141 431 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 DFFAO00273 331 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 DCLK1O15075 740 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 CD48P09326 243 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 IL4RP24394 825 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 CTNNA2P26232 953 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 ACVRL1P37023 503 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 IL12RB1P42701 662 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 WASP42768 502 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 SATB1Q01826 763 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 SERINC3Q13530 473 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 BYSLQ13895 437 aaKnown RBP12.09□□□□□ -0.47
SNCA-202ENST00000345009 ANGPT1Q15389 498 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 PTPRNQ16849 979 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 HNRNPA1L2Q32P51 320 aaKnown RBP12.09□□□□□ -0.47
SNCA-202ENST00000345009 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 INO80DQ53TQ3 878 aaPredicted RBP12.09□□□□□ -0.47
SNCA-202ENST00000345009 TFDP3Q5H9I0 405 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 TMCO4Q5TGY1 634 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 DSG4Q86SJ6 1040 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 CPNE8Q86YQ8 564 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 RFX6Q8HWS3 928 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 PGBD3Q8N328 593 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 RNF157Q96PX1 679 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 ACOX2Q99424 681 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 GOLPH3Q9H4A6 298 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 PRMT8Q9NR22 394 aaPredicted RBP12.09□□□□□ -0.47
SNCA-202ENST00000345009 NDFIP2Q9NV92 336 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 KLHL11Q9NVR0 708 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 BCCIPQ9P287 314 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNCA-202ENST00000345009 SLCO3A1Q9UIG8 710 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 RAD54BQ9Y620 910 aa12.09□□□□□ -0.47
SNCA-202ENST00000345009 ZNF318Q5VUA4 2279 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 NUP205Q92621 2012 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 CCDC163A0A0D9SF12 145 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 WASH3PC4AMC7 463 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 APOL1O14791 398 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 ATP9BO43861 1147 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 KIF5CO60282 957 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 SNAP91O60641 907 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 ADAM23O75077 832 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 CTSOP43234 321 aaPredicted RBP12.08□□□□□ -0.48
SNCA-202ENST00000345009 NR2C2P49116 596 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 PAPOLAP51003 745 aaKnown RBP12.08□□□□□ -0.48
SNCA-202ENST00000345009 RPS6KA1Q15418 735 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 DLG2Q15700 870 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 CCDC181Q5TID7 509 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 PKN3Q6P5Z2 889 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 BBS5Q8N3I7 341 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 SH2D3CQ8N5H7 860 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 PCDH19Q8TAB3 1148 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 HMCESQ96FZ2 354 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 CELF6Q96J87 481 aaKnown RBP12.08□□□□□ -0.48
SNCA-202ENST00000345009 MRGPRX3Q96LB0 322 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 PSMB7Q99436 277 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 CEP44Q9C0F1 390 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 SLC39A8Q9C0K1 460 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 KCNF1Q9H3M0 494 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 LRRC19Q9H756 370 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 SP110Q9HB58 689 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 ZDHHC4Q9NPG8 344 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 EBF1Q9UH73 591 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 EFR3BQ9Y2G0 817 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
SNCA-202ENST00000345009 COL4A3Q01955 1670 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 TCRBV21S2A2A0A5A6 115 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 ZMPSTE24O75844 475 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 TJP3O95049 919 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 FTCDO95954 541 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 ACADMP11310 421 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 PRKCHP24723 683 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 CDKN2BP42772 138 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 SERPINH1P50454 418 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 DNA2P51530 1060 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 IL10RBQ08334 325 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 CAMK2GQ13555 558 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms