RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PRDM16Q9HAZ2 1276 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 SEMA4GQ9NTN9 838 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.15□□□□□ -0.14
TPM4-202ENST00000344824 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 LRRD1A4D1F6 860 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 I6L893 689 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 NDUFS2O75306 463 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 CNTN5O94779 1100 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 ASLP04424 464 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 RHOCP08134 193 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 TCP1P17987 556 aaKnown RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 MZF1P28698 734 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 STK19P49842 368 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 ZNF177Q13360 481 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 KRT81Q14533 505 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 CA9Q16790 459 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 MAP7D1Q3KQU3 841 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 ARL13BQ3SXY8 428 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 AASDHQ4L235 1098 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 SEL1L2Q5TEA6 688 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 LRRC38Q5VT99 294 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 LPCAT2Q7L5N7 544 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 BNIPLQ7Z465 357 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 KIAA0907Q7Z7F0 614 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 FAM124AQ86V42 546 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 TMPRSS6Q8IU80 811 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 C12orf50Q8NA57 414 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 RAPGEF5Q92565 580 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 PRCCQ92733 491 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 MS4A14Q96JA4 679 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 RPL10LQ96L21 214 aaKnown RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 MAGEB5Q9BZ81 275 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 DHX35Q9H5Z1 703 aaKnown RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 DDX56Q9NY93 547 aaKnown RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 SMARCAL1Q9NZC9 954 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 MPP6Q9NZW5 540 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 MBD1Q9UIS9 605 aaPredicted RBP14.14□□□□□ -0.15
TPM4-202ENST00000344824 VPS28Q9UK41 221 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 AP4E1Q9UPM8 1137 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 ERVW-1Q9UQF0 538 aa14.14□□□□□ -0.15
TPM4-202ENST00000344824 TP53BP1Q12888 1972 aaPredicted RBP14.13□□□□□ -0.15
TPM4-202ENST00000344824 IGHV1OR15-9A0A0B4J2B8 117 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 E9PAM4 449 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 ZNF217O75362 1048 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 CLDN11O75508 207 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 PYGMP11217 842 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 COPAP53621 1224 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 CDH4P55283 916 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 CDH6P55285 790 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 ECT2LQ008S8 904 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 ENPP2Q13822 863 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 SF3A2Q15428 464 aaKnown RBP14.13□□□□□ -0.15
TPM4-202ENST00000344824 ALFQ53S48 1182 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 PPP6R3Q5H9R7 873 aaPredicted RBP14.13□□□□□ -0.15
TPM4-202ENST00000344824 ERMARDQ5T6L9 678 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 CXorf57Q6NSI4 855 aaKnown RBP14.13□□□□□ -0.15
TPM4-202ENST00000344824 PRR23CQ6ZRP0 262 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 POLNQ7Z5Q5 900 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 KATNAL2Q8IYT4 538 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 PYROXD2Q8N2H3 581 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 GPR161Q8N6U8 529 aaKnown RBP14.13□□□□□ -0.15
TPM4-202ENST00000344824 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 OR2T3Q8NH03 318 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 PIGKQ92643 395 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 TTC17Q96AE7 1141 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 LOXL4Q96JB6 756 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 ZC3H10Q96K80 434 aaKnown RBP14.13□□□□□ -0.15
TPM4-202ENST00000344824 PBKQ96KB5 322 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 LMLNQ96KR4 655 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 CD248Q9HCU0 757 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 SLC25A13Q9UJS0 675 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 FZD10Q9ULW2 581 aa14.13□□□□□ -0.15
TPM4-202ENST00000344824 TTC34A8MYJ7 566 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 ZRANB2O95218 330 aaKnown RBP eCLIP14.12□□□□□ -0.15
TPM4-202ENST00000344824 CD48P09326 243 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 NNMTP40261 264 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 LMNB2Q03252 620 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 EFHC2Q5JST6 749 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 CCDC181Q5TID7 509 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 LYSMD4Q5XG99 296 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 KAZNQ674X7 775 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 TCEAL6Q6IPX3 200 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 RWDD4Q6NW29 188 aaKnown RBP14.12□□□□□ -0.15
TPM4-202ENST00000344824 MFSD7Q6UXD7 560 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 SLC36A4Q6YBV0 504 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 ADAT2Q7Z6V5 191 aaKnown RBP14.12□□□□□ -0.15
TPM4-202ENST00000344824 GANCQ8TET4 914 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 TEKT4Q8WW24 435 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 TCEAL3Q969E4 200 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 RBM41Q96IZ5 413 aaKnown RBP14.12□□□□□ -0.15
TPM4-202ENST00000344824 KCTD15Q96SI1 283 aaPredicted RBP14.12□□□□□ -0.15
TPM4-202ENST00000344824 CALN1Q9BXU9 219 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 TMEM245Q9H330 911 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 SUN2Q9UH99 717 aa14.12□□□□□ -0.15
TPM4-202ENST00000344824 MEI4A8MW99 385 aa14.11□□□□□ -0.15
TPM4-202ENST00000344824 BNIP3LO60238 219 aa14.11□□□□□ -0.15
TPM4-202ENST00000344824 LRP3O75074 770 aa14.11□□□□□ -0.15
TPM4-202ENST00000344824 SIN3BO75182 1162 aa14.11□□□□□ -0.15
TPM4-202ENST00000344824 DNTTP04053 509 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms