RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 MYADMQ96S97 322 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 GAS2L1Q99501 681 aaPredicted RBP16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 FEM1AQ9BSK4 669 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 TXLNGYQ9BZA5 131 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 MUC3BQ9H195 1237 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 GBA3Q9H227 469 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 RBM22Q9NW64 420 aaKnown RBP eCLIP16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 MARK1Q9P0L2 795 aa16.67■□□□□ 0.26
CEACAM1-202ENST00000344391 HEPACAM2A8MVW5 462 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 CACNG3O60359 315 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 NFKB1P19838 968 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 TPSB2P20231 275 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 MZF1P28698 734 aaPredicted RBP16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 DHX9Q08211 1270 aaKnown RBP16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 SLC10A7Q0GE19 358 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 TPSAB1Q15661 275 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 MARC1Q5VT66 337 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 TMC3Q7Z5M5 1100 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 CCDC117Q8IWD4 279 aaPredicted RBP16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 MREGQ8N565 214 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 NSMCE1Q8WV22 266 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 GORASP1Q9BQQ3 440 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 TSPYL1Q9H0U9 437 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 DUS2Q9NX74 493 aaKnown RBP16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 RSPH14Q9UHP6 348 aa16.66■□□□□ 0.26
CEACAM1-202ENST00000344391 PPFIA2O75334 1257 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 HLA-DQB2P05538 268 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 APRTP07741 180 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 GLDCP23378 1020 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 HSPA9P38646 679 aaKnown RBP16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 CSKP41240 450 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 IFNAR2P48551 515 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 NUMBP49757 651 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 GAD2Q05329 585 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 EML3Q32P44 896 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 SYCP2LQ5T4T6 812 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 TMCO4Q5TGY1 634 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 TANGO2Q6ICL3 276 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 SMRP1Q8NCR6 262 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 LMLNQ96KR4 655 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 POMKQ9H5K3 350 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 GLOD4Q9HC38 313 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 KIAA1522Q9P206 1035 aaPredicted RBP16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 HPCAL4Q9UM19 191 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 SPTBN5Q9NRC6 3674 aaKnown RBP16.65■□□□□ 0.26
CEACAM1-202ENST00000344391 E7EVH7 732 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 NEDD8-MDP1E9PL57 170 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 F5H423 210 aaPredicted RBP16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 GOLGA8MH3BSY2 632 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 ZMPSTE24O75844 475 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 MMP13P45452 471 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 LMAN2Q12907 356 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 LBRQ14739 615 aaKnown RBP16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 SLMAPQ14BN4 828 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 LEKR1Q6ZMV7 388 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 OTOP3Q7RTS5 596 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 CCDC25Q86WR0 208 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 KLHDC8BQ8IXV7 354 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 MCUQ8NE86 351 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 E2F7Q96AV8 911 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 FCRL5Q96RD9 977 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 FUT8Q9BYC5 575 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 ZFP14Q9HCL3 533 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 EIF2B3Q9NR50 452 aaKnown RBP16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 VPS28Q9UK41 221 aa16.64■□□□□ 0.25
CEACAM1-202ENST00000344391 CBX4O00257 560 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 NEBLO76041 1014 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 LAMP2P13473 410 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 TYRP14679 529 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 CD70P32970 193 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 PLK1P53350 603 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 ARF5P84085 180 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 CDK16Q00536 496 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 SLC12A1Q13621 1099 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 CASP8Q14790 479 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 DHCR24Q15392 516 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 TRIM68Q6AZZ1 485 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 HDXQ7Z353 690 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 PDCD7Q8N8D1 485 aaKnown RBP16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 DCAF4L2Q8NA75 395 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 TSEN2Q8NCE0 465 aaKnown RBP16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 ASIC4Q96FT7 647 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 NECTIN4Q96NY8 510 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 RBM15Q96T37 977 aaKnown RBP eCLIP16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 FRMD8Q9BZ67 464 aaPredicted RBP16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 PHACTR1Q9C0D0 580 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 NT5MQ9NPB1 228 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 UBA2Q9UBT2 640 aaPredicted RBP16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 SNAP91O60641 907 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 CD160O95971 181 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 CYP17A1P05093 508 aa16.63■□□□□ 0.25
CEACAM1-202ENST00000344391 ARL4CP56559 192 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms