RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RSBN1Q5VWQ0 802 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PCDH20Q8N6Y1 951 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 HPS1Q92902 700 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 RCN3Q96D15 328 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 COQ7Q99807 217 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PDGFCQ9NRA1 345 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ZNF197O14709 1029 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 FAM20BO75063 409 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 MFN2O95140 757 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SLC25A27O95847 323 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PSMB9P28065 219 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 AARS2Q5JTZ9 985 aaKnown RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 DPY19L2Q6NUT2 758 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SPATA2LQ8IUW3 424 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ZSWIM2Q8NEG5 633 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SEMA4DQ92854 862 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 SKA1Q96BD8 255 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 ST6GALNAC4Q9H4F1 302 aa4.86□□□□□ -1.63
CSMD3-203ENST00000343508 PLA2G6O60733 806 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 GPIP06744 558 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ECHS1P30084 290 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 AIF1P55008 147 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ORC1Q13415 861 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 LRRC71Q8N4P6 559 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 FAM45AQ8TCE6 357 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 COQ4Q9Y3A0 265 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ARAP2Q8WZ64 1704 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 FAM95CA0A1B0GW59 222 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 EFCAB10A6NFE3 127 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TISP43B9A030 160 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TYROBPO43914 113 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PIAS1O75925 651 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 MOCS2O96007 188 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 MMP10P09238 476 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 UNGP13051 313 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 MAPK1P28482 360 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 NOS2P35228 1153 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 WDR4P57081 412 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CRTC3Q6UUV7 619 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 BRSK2Q8IWQ3 736 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CAPSLQ8WWF8 208 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PNPLA8Q9NP80 782 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CYLDQ9NQC7 956 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TBCCD1Q9NVR7 557 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ZNF70Q9UC06 446 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 BTBD3Q9Y2F9 522 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 BCORQ6W2J9 1755 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ZSCAN9O15535 394 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CST1P01037 141 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 LHX1P48742 406 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 BFSP2Q13515 415 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PSMD5Q16401 504 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 NPNTQ6UXI9 565 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 UNC5AQ6ZN44 842 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 NUAK2Q9H093 628 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 SIX2Q9NPC8 291 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ENTPD7Q9NQZ7 604 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PTBP2Q9UKA9 531 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 EFCAB14O75071 495 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 LYPLA2O95372 231 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 C4BPAP04003 597 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ERBB2P04626 1255 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 RENBPP51606 427 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ADGRE1Q14246 886 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CYP4X1Q8N118 509 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 GRPEL2Q8TAA5 225 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 KATNAL1Q9BW62 490 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 IGSF9Q9P2J2 1179 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 GNPTGQ9UJJ9 305 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 SLC30A1Q9Y6M5 507 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ZC3H4Q9UPT8 1303 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PDLIM1O00151 329 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TXNP10599 105 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 YWHAZP63104 245 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 POLD3Q15054 466 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 AMHR2Q16671 573 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 STARD8Q92502 1023 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 GPATCH1Q9BRR8 931 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CHID1Q9BWS9 393 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CLDN25C9JDP6 229 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PMPCBO75439 489 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 CYP1A1P04798 512 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PGK2P07205 417 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 RHBDL3P58872 404 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 MPP1Q00013 466 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 KLF10Q13118 480 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 Q3C1V9 767 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PTRHD1Q6GMV3 140 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ISLR2Q6UXK2 745 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 FAM131BQ86XD5 332 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 SCN4BQ8IWT1 228 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TMEM132CQ8N3T6 1108 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 FBXO39Q8N4B4 442 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 RAB2BQ8WUD1 216 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TADA1Q96BN2 335 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 ZFYVE28Q9HCC9 887 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 PADI4Q9UM07 663 aa4.85□□□□□ -1.63
CSMD3-203ENST00000343508 UBQLN1Q9UMX0 589 aaKnown RBP4.85□□□□□ -1.63
CSMD3-203ENST00000343508 TRIM17Q9Y577 477 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms